RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 PITHD1Q9GZP4 211 aaPredicted RBP7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 AICDAQ9GZX7 198 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 RHBGQ9H310 441 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 EHD1Q9H4M9 534 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 ALG9Q9H6U8 611 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 PRDM9Q9NQV7 894 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 COPG2Q9UBF2 871 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 PTBP2Q9UKA9 531 aaKnown RBP7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 ICE1Q9Y2F5 2266 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 FLNCQ14315 2725 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 PTPN13Q12923 2485 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 EML6Q6ZMW3 1958 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 A0A0G2JN53 185 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 TCRBV16S1A1N1A0A5B0 115 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 A1L4Q6 167 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 LRIT2A6NDA9 550 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 WIPF3A6NGB9 483 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 SAGE2PA6NJ88 616 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 SUPT3HB4E1H0 165 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 FAM227AF5H4B4 570 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 ERI3O43414 337 aaKnown RBP7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 PRAMEF4O60810 478 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 SUPT3HO75486 399 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 CLEC3AO75596 197 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 URI1O94763 535 aaPredicted RBP7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 CRYABP02511 175 aaKnown RBP7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 LTA4HP09960 611 aaKnown RBP7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 SLC35E2BP0CK96 405 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 TFEBP19484 476 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 MAOAP21397 527 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 CRABP2P29373 138 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 GMPRP36959 345 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 TDGF1P3P51864 188 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 DLG1Q12959 904 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 LAPTM5Q13571 262 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 TUBA3CQ13748 450 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 DOC2AQ14183 400 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 HIST2H2ACQ16777 129 aaPredicted RBP7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 C4orf17Q53FE4 359 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 XKR6Q5GH73 641 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 ZNF766Q5HY98 468 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 PRAMEF9Q5VWM5 478 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 HIST2H2AA3Q6FI13 130 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 TRIM40Q6P9F5 258 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 TUBA3EQ6PEY2 450 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 LRRC70Q7Z2Q7 622 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 ISCA2Q86U28 154 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 CYP4X1Q8N118 509 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 ARMC2Q8NEN0 867 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 DNAJB8Q8NHS0 232 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 ELP5Q8TE02 316 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 MS4A6EQ96DS6 147 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 WDR34Q96EX3 536 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 ATOH8Q96SQ7 321 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 NPAS2Q99743 824 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 UTP23Q9BRU9 249 aaKnown RBP7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 LRRC1Q9BTT6 524 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 EFCAB11Q9BUY7 163 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 NPLQ9BXD5 320 aaPredicted RBP7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 CD244Q9BZW8 370 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 REXO4Q9GZR2 422 aaKnown RBP7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 COPS7BQ9H9Q2 264 aaPredicted RBP7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 NMRAL1Q9HBL8 299 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 NECTIN3Q9NQS3 549 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 ANKRD10Q9NXR5 420 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 NUDT4Q9NZJ9 180 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 OSGIN2Q9Y236 505 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 MMACHCQ9Y4U1 282 aa7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 FLNBO75369 2602 aaKnown RBP7.95□□□□□ -1.14
HMGXB4-207ENST00000498212 IGKV3D-11A0A0A0MRZ8 115 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 GABRR3A8MPY1 467 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 A8MUA0 341 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 UBXN8O00124 270 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 B3GALT2O43825 422 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 MAN1A2O60476 641 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 KERAO60938 352 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 CD22P20273 847 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 PHBP35232 272 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 CD96P40200 585 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 KCNC1P48547 511 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 ST13P50502 369 aaKnown RBP7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 PLA2G16P53816 162 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 PER3P56645 1201 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 RAB38P57729 211 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 KCNK10P57789 538 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 OC90Q02509 493 aaPredicted RBP7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 IRF8Q02556 426 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 GUCY2DQ02846 1103 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 CHIT1Q13231 466 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 RUNX2Q13950 521 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 OR1C1Q15619 314 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 WHAMMP3Q1A5X7 153 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 ADPRMQ3LIE5 342 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 PAGE2BQ5JRK9 111 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 MROH9Q5TGP6 573 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 HIST2H2BCQ6DN03 193 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 ADNP2Q6IQ32 1131 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 VN1R5Q7Z5H4 357 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 CCDC91Q7Z6B0 441 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 SCUBE1Q8IWY4 988 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms