RNA–Protein interactions for RNA: ENST00000498189.1

BBS9-215, Transcript of Bardet-Biedl syndrome 9, human

TSL 2

Gene BBS9, Length 614 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS9-215	ENST00000498189	CAND1	Q86VP6	1230 aa	Known RBP	6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	SLC26A11	Q86WA9	606 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	SLC7A5P1	Q8MH63	180 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	TCAIM	Q8N3R3	496 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	SLC5A8	Q8N695	610 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	NAT8L	Q8N9F0	302 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	TRPV3	Q8NET8	790 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	OR11G2	Q8NGC1	345 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	6.59	□□□□□ -1.35	3e-6	■■■■■ 50.8
BBS9-215	ENST00000498189	MMAB	Q96EY8	250 aa	Predicted RBP	6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	PLPPR2	Q96GM1	343 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	THOC3	Q96J01	351 aa	Known RBP	6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	ZNF354B	Q96LW1	612 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	IL17F	Q96PD4	163 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	OR2A5	Q96R48	311 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	OSBPL9	Q96SU4	736 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	RUFY1	Q96T51	708 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	PKP4	Q99569	1192 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	BARD1	Q99728	777 aa	Known RBP	6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	PIF1	Q9H611	641 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	CNOT10	Q9H9A5	744 aa	Known RBP	6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	POPDC3	Q9HBV1	291 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	SLC6A20	Q9NP91	592 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	TXNDC16	Q9P2K2	825 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	SUCO	Q9UBS9	1254 aa	Known RBP	6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	TAC3	Q9UHF0	121 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	SNX12	Q9UMY4	172 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	NOSIP	Q9Y314	301 aa	Known RBP	6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	HS3ST3B1	Q9Y662	390 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	ANKRD12	Q6UB98	2062 aa		6.59	□□□□□ -1.35
BBS9-215	ENST00000498189	FLNB	O75369	2602 aa	Known RBP	6.58	□□□□□ -1.36
BBS9-215	ENST00000498189		A0A0B4J203	849 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189		A0A1W2PPV9	198 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	BLACE	A4D250	179 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	EIF3H	O15372	352 aa	Known RBP eCLIP	6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	CTSV	O60911	334 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	ALOX12B	O75342	701 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	H2AFY	O75367	372 aa	Known RBP	6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	CBX6	O95503	412 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	GSTA2	P09210	222 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	C8orf89	P0DMQ9	161 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	NR1D1	P20393	614 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	GNLY	P22749	145 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	CXCR5	P32302	372 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	AHR	P35869	848 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	SLC1A2	P43004	574 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	VPS41	P49754	854 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	CCR8	P51685	355 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	SLC12A2	P55011	1212 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	STXBP1	P61764	594 aa	Known RBP	6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	CCZ1B	P86790	482 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	CCZ1	P86791	482 aa	Predicted RBP	6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	MPP1	Q00013	466 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	CAV1	Q03135	178 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	SRSF1	Q07955	248 aa	Known RBP eCLIP	6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	TGM3	Q08188	693 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	MRPL28	Q13084	256 aa	Known RBP	6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	CALCOCO2	Q13137	446 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	BIK	Q13323	160 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	TSTA3	Q13630	321 aa	Predicted RBP	6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	TOMM20	Q15388	145 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	PLEKHN1	Q494U1	663 aa	Predicted RBP	6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	HSP90AA5P	Q58FG0	334 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	RNASEH2B	Q5TBB1	312 aa	Known RBP	6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	PLAG1	Q6DJT9	500 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	FIP1L1	Q6UN15	594 aa	Known RBP	6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	TMEM205	Q6UW68	189 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	NAPRT	Q6XQN6	538 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	SYT10	Q6XYQ8	523 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	COX15	Q7KZN9	410 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	MAMDC2	Q7Z304	686 aa	Predicted RBP	6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	ADAMTSL2	Q86TH1	951 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	ASPG	Q86U10	573 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	LDB1	Q86U70	411 aa	Predicted RBP	6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	SNX32	Q86XE0	403 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	GBP7	Q8N8V2	638 aa	Predicted RBP	6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	SMYD1	Q8NB12	490 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	SRFBP1	Q8NEF9	429 aa	Known RBP	6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	ABHD11	Q8NFV4	315 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	FAM81A	Q8TBF8	368 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	M1AP	Q8TC57	530 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	LKAAEAR1	Q8TD35	194 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	CD200R1	Q8TD46	325 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	ACMSD	Q8TDX5	336 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	NAT14	Q8WUY8	206 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	ZNF480	Q8WV37	535 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	FAR1	Q8WVX9	515 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	ZNF75CP	Q92670	426 aa	Predicted RBP	6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	SNRNP40	Q96DI7	357 aa	Known RBP	6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	TSPAN17	Q96FV3	270 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	CERS2	Q96G23	380 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	FRMD6	Q96NE9	622 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	LPAR4	Q99677	370 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	GPR21	Q99679	349 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	AIF1L	Q9BQI0	150 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	ACAT2	Q9BWD1	397 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	OSBPL10	Q9BXB5	764 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	ROGDI	Q9GZN7	287 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	ZNF700	Q9H0M5	742 aa		6.58	□□□□□ -1.36
BBS9-215	ENST00000498189	TMEM165	Q9HC07	324 aa		6.58	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms