RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 KIF18AQ8NI77 898 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 RAB3IPQ96QF0 476 aaPredicted RBP2.7□□□□□ -1.98
SMC4-227ENST00000497984 PCDHB18PQ96TA0 734 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 HNRNPABQ99729 332 aaKnown RBP2.7□□□□□ -1.98
SMC4-227ENST00000497984 UBAC1Q9BSL1 405 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 KATNB1Q9BVA0 655 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 TEX13BQ9BXU2 312 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 ST6GALNAC4Q9H4F1 302 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 FNDC4Q9H6D8 234 aaPredicted RBP2.7□□□□□ -1.98
SMC4-227ENST00000497984 PFDN4Q9NQP4 134 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 PHPT1Q9NRX4 125 aaPredicted RBP2.7□□□□□ -1.98
SMC4-227ENST00000497984 CLEC5AQ9NY25 188 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 KLK4Q9Y5K2 254 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 COLEC10Q9Y6Z7 277 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 TCP10L2B9ZVM9 353 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 H0Y9J4 135 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 INPP4BO15327 924 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 PRAF2O60831 178 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 PGLSO95336 258 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 PENKP01210 267 aaPredicted RBP2.69□□□□□ -1.98
SMC4-227ENST00000497984 ADRA2CP18825 462 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 LMO2P25791 158 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 FCGR2BP31994 310 aaPredicted RBP2.69□□□□□ -1.98
SMC4-227ENST00000497984 FCGR2CP31995 323 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 KRT20P35900 424 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 ABCE1P61221 599 aaKnown RBP2.69□□□□□ -1.98
SMC4-227ENST00000497984 NUCB1Q02818 461 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 GCKRQ14397 625 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 MLF2Q15773 248 aaPredicted RBP2.69□□□□□ -1.98
SMC4-227ENST00000497984 ZNF79Q15937 498 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 UTF1Q5T230 341 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 C9orf66Q5T8R8 295 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 TXNRD3NBQ6F5E7 133 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 TCEAL6Q6IPX3 200 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 BTNL8Q6UX41 500 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 IGFL3Q6UXB1 125 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 C15orf52Q6ZUT6 534 aaKnown RBP2.69□□□□□ -1.98
SMC4-227ENST00000497984 TMUB2Q71RG4 321 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 OR8H2Q8N162 312 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 CCAR2Q8N163 923 aaKnown RBP2.69□□□□□ -1.98
SMC4-227ENST00000497984 BADQ92934 168 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 FER1L6-AS2Q96M78 137 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 ALKBH7Q9BT30 221 aaPredicted RBP2.69□□□□□ -1.98
SMC4-227ENST00000497984 INPP5KQ9BT40 448 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 RBM24Q9BX46 236 aaKnown RBP2.69□□□□□ -1.98
SMC4-227ENST00000497984 RPF1Q9H9Y2 349 aaKnown RBP2.69□□□□□ -1.98
SMC4-227ENST00000497984 ABCD2Q9UBJ2 740 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 CFDP1Q9UEE9 299 aaPredicted RBP2.69□□□□□ -1.98
SMC4-227ENST00000497984 UBQLN2Q9UHD9 624 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 PILRAQ9UKJ1 303 aa2.69□□□□□ -1.98
SMC4-227ENST00000497984 HTR3EA5X5Y0 456 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 GLTPD2A6NH11 291 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 H3BMM5 538 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 KIF5CO60282 957 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 FCGR3BO75015 233 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 SIX3O95343 332 aaPredicted RBP2.68□□□□□ -1.98
SMC4-227ENST00000497984 MOCS2O96007 188 aaPredicted RBP2.68□□□□□ -1.98
SMC4-227ENST00000497984 MT-ND2P03891 347 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 ADORA3P0DMS8 318 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 ATP6V1B1P15313 513 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 GOT1P17174 413 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 CTNNA2P26232 953 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 FEN1P39748 380 aaKnown RBP2.68□□□□□ -1.98
SMC4-227ENST00000497984 SIX1Q15475 284 aaPredicted RBP2.68□□□□□ -1.98
SMC4-227ENST00000497984 C1orf141Q5JVX7 400 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 SHEQ5VZ18 495 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 FAM91A1Q658Y4 838 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 TRMT11Q7Z4G4 463 aaKnown RBP2.68□□□□□ -1.98
SMC4-227ENST00000497984 FAM219AQ8IW50 185 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 APCDD1Q8J025 514 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 OCC1Q8TAD7 63 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 TSSK2Q96PF2 358 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 SERINC2Q96SA4 455 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 NACAP1Q9BZK3 213 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 MOB1AQ9H8S9 216 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 SATB2Q9UPW6 733 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 RUVBL2Q9Y230 463 aaKnown RBP2.68□□□□□ -1.98
SMC4-227ENST00000497984 SLC6A5Q9Y345 797 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 SPATA31D1Q6ZQQ2 1576 aa2.68□□□□□ -1.98
SMC4-227ENST00000497984 A0A0B4J203 849 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 IGHV3-16A0A0C4DH30 117 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 BCLAF3A2AJT9 711 aaKnown RBP2.67□□□□□ -1.98
SMC4-227ENST00000497984 K7EQG2 157 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 PDHXO00330 501 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 RTCAO00442 366 aaKnown RBP2.67□□□□□ -1.98
SMC4-227ENST00000497984 DKC1O60832 514 aaKnown RBP eCLIP2.67□□□□□ -1.98
SMC4-227ENST00000497984 FAM200BP0CF97 657 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 SSTR1P30872 391 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 TIA1P31483 386 aaKnown RBP eCLIP2.67□□□□□ -1.985e-7■■■■□ 23.6
SMC4-227ENST00000497984 GSK3BP49841 420 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 NPY4RP50391 375 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 HNRNPA3P51991 378 aaKnown RBP2.67□□□□□ -1.98
SMC4-227ENST00000497984 RIDAP52758 137 aaKnown RBP2.67□□□□□ -1.98
SMC4-227ENST00000497984 PPIAP62937 165 aaKnown RBP2.67□□□□□ -1.98
SMC4-227ENST00000497984 LBHQ53QV2 105 aaPredicted RBP2.67□□□□□ -1.98
SMC4-227ENST00000497984 LEMD1Q68G75 181 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 KLHL10Q6JEL2 608 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 Q6ZVQ6 151 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 PIGWQ7Z7B1 504 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 SLFN11Q7Z7L1 901 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms