RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ZNF354BQ96LW1 612 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 MAGEB10Q96LZ2 347 aaPredicted RBP14.77□□□□□ -0.05
HDAC4-213ENST00000496347 ATOH8Q96SQ7 321 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 NPLQ9BXD5 320 aaPredicted RBP14.77□□□□□ -0.05
HDAC4-213ENST00000496347 AICDAQ9GZX7 198 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.77□□□□□ -0.05
HDAC4-213ENST00000496347 KLHL31Q9H511 634 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 ACSS3Q9H6R3 686 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 KCNK13Q9HB14 408 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 PRDM9Q9NQV7 894 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 IGSF5Q9NSI5 407 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 OLAHQ9NV23 265 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 PLA2G3Q9NZ20 509 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 TCRBV16S1A1N1A0A5B0 115 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 ANKDD1BA6NHY2 528 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 SAGE2PA6NJ88 616 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 SUPT3HB4E1H0 165 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 KIF2AO00139 706 aaPredicted RBP14.76□□□□□ -0.05
HDAC4-213ENST00000496347 PRAMEF2O60811 474 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 B4GALT2O60909 372 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 SUPT3HO75486 399 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 SERPINB1P30740 379 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 SERPINB8P50452 374 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 SLC26A5P58743 744 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 ACTN3Q08043 901 aaPredicted RBP14.76□□□□□ -0.05
HDAC4-213ENST00000496347 TGM3Q08188 693 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 TERF2Q15554 542 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 MEP1AQ16819 746 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 FAM83EQ2M2I3 478 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 EIF2S3LQ2VIR3 472 aaKnown RBP14.76□□□□□ -0.05
HDAC4-213ENST00000496347 ACER2Q5QJU3 275 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 TRIM40Q6P9F5 258 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 CA13Q8N1Q1 262 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 MMGT1Q8N4V1 131 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 OR2L5Q8NG80 312 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 RHEBL1Q8TAI7 183 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 CCT6BQ92526 530 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 UBE2E3Q969T4 207 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 PTCHD1Q96NR3 888 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 FUT8Q9BYC5 575 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 CD244Q9BZW8 370 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 REXO4Q9GZR2 422 aaKnown RBP14.76□□□□□ -0.05
HDAC4-213ENST00000496347 RHBGQ9H310 441 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 SNX15Q9NRS6 342 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 SLC5A6Q9Y289 635 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 ACOT9Q9Y305 439 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 PCDHGB6Q9Y5F9 930 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 NOTCH2Q04721 2471 aa14.76□□□□□ -0.05
HDAC4-213ENST00000496347 B3GALT2O43825 422 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 CCNT2O60583 730 aaKnown RBP14.75□□□□□ -0.05
HDAC4-213ENST00000496347 PRAMEF4O60810 478 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 EPORP19235 508 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 CD22P20273 847 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 CASP2P42575 452 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 BTN3A2P78410 334 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 IRF8Q02556 426 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 PCDH1Q08174 1060 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 DLG1Q12959 904 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 DOC2AQ14183 400 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 RCN2Q14257 317 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 FBXO48Q5FWF7 155 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 PRAMEF9Q5VWM5 478 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 ZNF324BQ6AW86 544 aaPredicted RBP14.75□□□□□ -0.05
HDAC4-213ENST00000496347 KLC3Q6P597 504 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 VN1R5Q7Z5H4 357 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 SCUBE1Q8IWY4 988 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 CENPLQ8N0S6 344 aaPredicted RBP14.75□□□□□ -0.05
HDAC4-213ENST00000496347 BEST3Q8N1M1 668 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 NR4A3Q92570 626 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 FMO2Q99518 471 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 COPS7BQ9H9Q2 264 aaPredicted RBP14.75□□□□□ -0.05
HDAC4-213ENST00000496347 STMN3Q9NZ72 180 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 NINJ2Q9NZG7 142 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 OPTCQ9UBM4 332 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 MRPS33Q9Y291 106 aaKnown RBP14.75□□□□□ -0.05
HDAC4-213ENST00000496347 ASB1Q9Y576 335 aa14.75□□□□□ -0.05
HDAC4-213ENST00000496347 A8MUI8 341 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 K7EPI3 171 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 UBXN8O00124 270 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 DNAJB6O75190 326 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 CRYABP02511 175 aaKnown RBP14.74□□□□□ -0.05
HDAC4-213ENST00000496347 CTAGE8P0CG41 777 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 MAOAP21397 527 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 KCNC1P48547 511 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 MTTPP55157 894 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 HSD17B7P56937 341 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 RAB38P57729 211 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 CHIT1Q13231 466 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 BMPR2Q13873 1038 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 NAA30Q147X3 362 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-213ENST00000496347 HIST2H2ACQ16777 129 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-213ENST00000496347 GLE1Q53GS7 698 aaKnown RBP14.74□□□□□ -0.05
HDAC4-213ENST00000496347 MROH9Q5TGP6 573 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 HIST2H2AA3Q6FI13 130 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 TAOK1Q7L7X3 1001 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 CRLF3Q8IUI8 442 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 CTAGE4Q8IX94 777 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 NOA1Q8NC60 698 aaKnown RBP14.74□□□□□ -0.05
HDAC4-213ENST00000496347 SRFBP1Q8NEF9 429 aaKnown RBP14.74□□□□□ -0.05
HDAC4-213ENST00000496347 ELP5Q8TE02 316 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms