RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 ACAP2Q15057 778 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 NDUFA9Q16795 377 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 CCDC153Q494R4 210 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 KRTCAP3Q53RY4 240 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 TNFAIP8L3Q5GJ75 292 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 CDKL4Q5MAI5 379 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 ACER2Q5QJU3 275 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 RBM20Q5T481 1227 aaKnown RBP8.29□□□□□ -1.08
SORT1-208ENST00000495777 TUBA3EQ6PEY2 450 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 LANCL3Q6ZV70 420 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 VN1R4Q7Z5H5 301 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 CPEB2Q7Z5Q1 589 aaKnown RBP8.29□□□□□ -1.08
SORT1-208ENST00000495777 TRABD2AQ86V40 505 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 SPPL2CQ8IUH8 684 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 SIAH3Q8IW03 269 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 HOMEZQ8IX15 550 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 SHISA5Q8N114 240 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 BEST3Q8N1M1 668 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 OR2W6PQ8NHA6 318 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 RHEBL1Q8TAI7 183 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 MRRFQ96E11 262 aaKnown RBP8.29□□□□□ -1.08
SORT1-208ENST00000495777 C14orf79Q96F83 325 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 UBXN10Q96LJ8 280 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 ZNF354BQ96LW1 612 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 FRMD6Q96NE9 622 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 SIGLEC12Q96PQ1 595 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 NPAS2Q99743 824 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 TREX2Q9BQ50 279 aaPredicted RBP8.29□□□□□ -1.08
SORT1-208ENST00000495777 SLC17A6Q9P2U8 582 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 C19orf25Q9UFG5 118 aaPredicted RBP8.29□□□□□ -1.08
SORT1-208ENST00000495777 TBK1Q9UHD2 729 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 SH3BGRL2Q9UJC5 107 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 TINAGQ9UJW2 476 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 GRID1Q9ULK0 1009 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 MED16Q9Y2X0 877 aa8.29□□□□□ -1.08
SORT1-208ENST00000495777 MTO1Q9Y2Z2 717 aaKnown RBP8.29□□□□□ -1.08
SORT1-208ENST00000495777 PKDREJQ9NTG1 2253 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 IGHV3-20A0A0C4DH32 117 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 HMX2A2RU54 273 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 GFYI3L273 518 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 CDK2AP1O14519 115 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 TM9SF1O15321 606 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 ZBTB14O43829 449 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 PIAS1O75925 651 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 WISP3O95389 354 aaPredicted RBP8.28□□□□□ -1.08
SORT1-208ENST00000495777 CLDN14O95500 239 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 SNRPB2P08579 225 aaKnown RBP8.28□□□□□ -1.08
SORT1-208ENST00000495777 HIST1H2AGP0C0S8 130 aaPredicted RBP8.28□□□□□ -1.08
SORT1-208ENST00000495777 SLC35E2BP0CK96 405 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 KRT4P19013 534 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 HIST1H2ADP20671 130 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 CAPN3P20807 821 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 SAT1P21673 171 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 CRHR1P34998 444 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 CD96P40200 585 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 KIR3DL1P43629 444 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 AGTR2P50052 363 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 CDKN2DP55273 166 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 SLC18A2Q05940 514 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 BMPR2Q13873 1038 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 BTBD16Q32M84 506 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 UBAP2Q5T6F2 1119 aaKnown RBP8.28□□□□□ -1.08
SORT1-208ENST00000495777 TMEM214Q6NUQ4 689 aaKnown RBP8.28□□□□□ -1.08
SORT1-208ENST00000495777 PAQR3Q6TCH7 311 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 SPNS3Q6ZMD2 512 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 PRSS41Q7RTY9 318 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 ANKRD37Q7Z713 158 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 CRLF3Q8IUI8 442 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 CHERPQ8IWX8 916 aaKnown RBP8.28□□□□□ -1.08
SORT1-208ENST00000495777 LGI4Q8N135 537 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 TCAIMQ8N3R3 496 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 PPFIBP2Q8ND30 876 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 OR9A4Q8NGU2 314 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 GIMAP7Q8NHV1 300 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 STAG3L4Q8TBR4 150 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 M1APQ8TC57 530 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 MZB1Q8WU39 189 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 PHF10Q8WUB8 498 aaKnown RBP8.28□□□□□ -1.08
SORT1-208ENST00000495777 SREK1Q8WXA9 508 aaKnown RBP8.28□□□□□ -1.08
SORT1-208ENST00000495777 METTL21AQ8WXB1 218 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 ATL1Q8WXF7 558 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 ASB11Q8WXH4 323 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 FAM136AQ96C01 138 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 MTFMTQ96DP5 389 aaKnown RBP8.28□□□□□ -1.08
SORT1-208ENST00000495777 CCDC126Q96EE4 140 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 LINGO1Q96FE5 620 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 APOPT1Q96IL0 206 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 MAGED4Q96JG8 741 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 HIST1H2AHQ96KK5 128 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 ATP6V1G3Q96LB4 118 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 SLC30A3Q99726 388 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 OLFM1Q99784 485 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 HIST1H2AJQ99878 128 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 SH3GL2Q99962 352 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 SPOCK3Q9BQ16 436 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 H2AFJQ9BTM1 129 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 CENPHQ9H3R5 247 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 TMBIM4Q9HC24 238 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 MMP25Q9NPA2 562 aa8.28□□□□□ -1.08
SORT1-208ENST00000495777 TSR3Q9UJK0 312 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms