RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 PCDH1Q08174 1060 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 TLR1Q15399 786 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 INPP5JQ15735 1006 aaPredicted RBP16.61■□□□□ 0.25
HDAC4-211ENST00000494800 PLEKHN1Q494U1 663 aaPredicted RBP16.61■□□□□ 0.25
HDAC4-211ENST00000494800 SFT2D3Q587I9 215 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 TECRLQ5HYJ1 363 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 PLAG1Q6DJT9 500 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 QSOX2Q6ZRP7 698 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 Q6ZS92 163 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 CHSY3Q70JA7 882 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 REPS1Q96D71 796 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 CNDP1Q96KN2 507 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 IMMP1LQ96LU5 166 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 PTCHD1Q96NR3 888 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 GPR78Q96P69 363 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 KCNC2Q96PR1 638 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 SERINC2Q96SA4 455 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 CENPKQ9BS16 269 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 ACTR8Q9H981 624 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 ZBTB20Q9HC78 741 aaPredicted RBP16.61■□□□□ 0.25
HDAC4-211ENST00000494800 PRDM9Q9NQV7 894 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 ZNF490Q9ULM2 529 aaPredicted RBP16.61■□□□□ 0.25
HDAC4-211ENST00000494800 ASB1Q9Y576 335 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 HELZ2Q9BYK8 2649 aaKnown RBP16.61■□□□□ 0.25
HDAC4-211ENST00000494800 IGHV3-20A0A0C4DH32 117 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 IQANK1A0A1B0GTG1 560 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 SYNDIG1LA6NDD5 238 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 OR2W5A6NFC9 320 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 CLDN4O14493 209 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 KLK8O60259 260 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 MYBL2P10244 700 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 ARL1P40616 181 aaPredicted RBP16.6■□□□□ 0.25
HDAC4-211ENST00000494800 CD97P48960 835 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 EFNA3P52797 238 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 MTTPP55157 894 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 E2F2Q14209 437 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 PCBP2Q15366 365 aaKnown RBP eCLIP16.6■□□□□ 0.25
HDAC4-211ENST00000494800 ADPRMQ3LIE5 342 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 TMEM35AQ53FP2 167 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 ABHD17BQ5VST6 288 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 LIPJQ5W064 366 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 GRHL2Q6ISB3 625 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 PAPD4Q6PIY7 484 aaKnown RBP16.6■□□□□ 0.25
HDAC4-211ENST00000494800 LAS2Q8IYD9 372 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 CA13Q8N1Q1 262 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 SIRT6Q8N6T7 355 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 Q8NA96 180 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 L2HGDHQ9H9P8 463 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 PCDHGA11Q9Y5H2 935 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 SPACA6W5XKT8 324 aa16.6■□□□□ 0.25
HDAC4-211ENST00000494800 A0A0G2JN53 185 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 UGDHO60701 494 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 PRAMEF4O60810 478 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 ITGAMP11215 1152 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 CD22P20273 847 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 TAS2R50P59544 299 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 GTF2H2Q13888 395 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 ZNF169Q14929 603 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-211ENST00000494800 TEX35Q5T0J7 233 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 PRAMEF9Q5VWM5 478 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 B3GNTL1Q67FW5 361 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-211ENST00000494800 GTF2H2CQ6P1K8 395 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 ABHD17CQ6PCB6 329 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 ADGRD1Q6QNK2 874 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 VN1R5Q7Z5H4 357 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 LCA5Q86VQ0 697 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 PLD6Q8N2A8 252 aaKnown RBP16.59■□□□□ 0.25
HDAC4-211ENST00000494800 PTGR2Q8N8N7 351 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-211ENST00000494800 GALNT11Q8NCW6 608 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 OR7G3Q8NG95 312 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 M1APQ8TC57 530 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 TSLPQ969D9 159 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 ATP6V1E2Q96A05 226 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 CMTM7Q96FZ5 175 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 MAGEB10Q96LZ2 347 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-211ENST00000494800 MRPL57Q9BQC6 102 aaKnown RBP16.59■□□□□ 0.25
HDAC4-211ENST00000494800 TBCDQ9BTW9 1192 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 MRPL46Q9H2W6 279 aaKnown RBP16.59■□□□□ 0.25
HDAC4-211ENST00000494800 KCNK13Q9HB14 408 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 ABI3Q9P2A4 366 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 XPR1Q9UBH6 696 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 FETUBQ9UGM5 382 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 MMACHCQ9Y4U1 282 aa16.59■□□□□ 0.25
HDAC4-211ENST00000494800 A8MUI8 341 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 C4orf51C9J302 202 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 STX16-NPEPL1H3BU86 382 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 STX16O14662 325 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 DNAJB6O75190 326 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 FAM153BP0C7A2 387 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 SOX11P35716 441 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 RAB38P57729 211 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 ZNF33BQ06732 778 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 SLC29A2Q14542 456 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 FAM153CQ494X1 144 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 SHISA5Q8N114 240 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 CYP4X1Q8N118 509 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 SUN3Q8TAQ9 357 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 ZNF473Q8WTR7 871 aaKnown RBP16.58■□□□□ 0.24
HDAC4-211ENST00000494800 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.58■□□□□ 0.24
HDAC4-211ENST00000494800 PSMF1Q92530 271 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms