RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 STXBP1P61764 594 aaKnown RBP21.71■■□□□ 1.07
COL27A1-208ENST00000494780 APCDD1LQ8NCL9 501 aa21.71■■□□□ 1.07
COL27A1-208ENST00000494780 PWWP2AQ96N64 755 aa21.71■■□□□ 1.07
COL27A1-208ENST00000494780 EGFL8Q99944 293 aa21.71■■□□□ 1.07
COL27A1-208ENST00000494780 VKORC1Q9BQB6 163 aa21.71■■□□□ 1.07
COL27A1-208ENST00000494780 AICDAQ9GZX7 198 aa21.71■■□□□ 1.07
COL27A1-208ENST00000494780 PDZD2O15018 2839 aa21.71■■□□□ 1.07
COL27A1-208ENST00000494780 KLRC4-KLRK1H3BQV0 150 aa21.7■■□□□ 1.06
COL27A1-208ENST00000494780 C19orf84I3L1E1 186 aa21.7■■□□□ 1.06
COL27A1-208ENST00000494780 ZSCAN12O43309 604 aa21.7■■□□□ 1.06
COL27A1-208ENST00000494780 GNAZP19086 355 aa21.7■■□□□ 1.06
COL27A1-208ENST00000494780 ARL4CP56559 192 aa21.7■■□□□ 1.06
COL27A1-208ENST00000494780 BTN3A2P78410 334 aa21.7■■□□□ 1.06
COL27A1-208ENST00000494780 MGAT5Q09328 741 aa21.7■■□□□ 1.06
COL27A1-208ENST00000494780 ZC3HC1Q86WB0 502 aaKnown RBP21.7■■□□□ 1.06
COL27A1-208ENST00000494780 ZNF295-AS1Q8N0V1 137 aa21.7■■□□□ 1.06
COL27A1-208ENST00000494780 TTLQ8NG68 377 aa21.7■■□□□ 1.06
COL27A1-208ENST00000494780 GAL3ST3Q96A11 431 aa21.7■■□□□ 1.06
COL27A1-208ENST00000494780 FAR2Q96K12 515 aa21.7■■□□□ 1.06
COL27A1-208ENST00000494780 DMRTA2Q96SC8 542 aa21.7■■□□□ 1.06
COL27A1-208ENST00000494780 NPLQ9BXD5 320 aaPredicted RBP21.7■■□□□ 1.06
COL27A1-208ENST00000494780 PSAT1Q9Y617 370 aa21.7■■□□□ 1.06
COL27A1-208ENST00000494780 GTF3C1Q12789 2109 aa21.7■■□□□ 1.06
COL27A1-208ENST00000494780 TEP1Q99973 2627 aaKnown RBP21.69■■□□□ 1.06
COL27A1-208ENST00000494780 TRBV11-1A0A0K0K1C0 115 aa21.69■■□□□ 1.06
COL27A1-208ENST00000494780 FAM95CA0A1B0GW59 222 aa21.69■■□□□ 1.06
COL27A1-208ENST00000494780 ZNHIT1O43257 154 aa21.69■■□□□ 1.06
COL27A1-208ENST00000494780 H2AFYO75367 372 aaKnown RBP21.69■■□□□ 1.06
COL27A1-208ENST00000494780 C1GALT1C1LP0DN25 315 aa21.69■■□□□ 1.06
COL27A1-208ENST00000494780 TCP1P17987 556 aaKnown RBP21.69■■□□□ 1.06
COL27A1-208ENST00000494780 GSTM2P28161 218 aa21.69■■□□□ 1.06
COL27A1-208ENST00000494780 SSTR2P30874 369 aa21.69■■□□□ 1.06
COL27A1-208ENST00000494780 MEOX1P50221 254 aa21.69■■□□□ 1.06
COL27A1-208ENST00000494780 NCCRP1Q6ZVX7 275 aaPredicted RBP21.69■■□□□ 1.06
COL27A1-208ENST00000494780 FRA10AC1Q70Z53 315 aa21.69■■□□□ 1.06
COL27A1-208ENST00000494780 FGD2Q7Z6J4 655 aa21.69■■□□□ 1.06
COL27A1-208ENST00000494780 ADAMTSL2Q86TH1 951 aa21.69■■□□□ 1.06
COL27A1-208ENST00000494780 SULF2Q8IWU5 870 aa21.69■■□□□ 1.06
COL27A1-208ENST00000494780 SCUBE1Q8IWY4 988 aa21.69■■□□□ 1.06
COL27A1-208ENST00000494780 KLHDC8AQ8IYD2 350 aa21.69■■□□□ 1.06
COL27A1-208ENST00000494780 PDLIM2Q96JY6 352 aa21.69■■□□□ 1.06
COL27A1-208ENST00000494780 RUNDC3BQ96NL0 473 aa21.69■■□□□ 1.06
COL27A1-208ENST00000494780 CTNNAL1Q9UBT7 734 aa21.69■■□□□ 1.06
COL27A1-208ENST00000494780 PPIEQ9UNP9 301 aaKnown RBP21.69■■□□□ 1.06
COL27A1-208ENST00000494780 ADAM10O14672 748 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 TFECO14948 347 aaPredicted RBP21.68■■□□□ 1.06
COL27A1-208ENST00000494780 MYO1DO94832 1006 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 WDR47O94967 919 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 PTGER1P34995 402 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 KIR3DL1P43629 444 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 SLC6A12P48065 614 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 HSD17B7P56937 341 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 TAS2R39P59534 338 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 ZNF460Q14592 562 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 TMIGD1Q6UXZ0 262 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 SLCO4C1Q6ZQN7 724 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.68■■□□□ 1.06
COL27A1-208ENST00000494780 TMEM156Q8N614 296 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 VMP1Q96GC9 406 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 VPS39Q96JC1 886 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 SEC16BQ96JE7 1060 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 SPOCK3Q9BQ16 436 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 PRTFDC1Q9NRG1 225 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 FBXW2Q9UKT8 454 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 CACNA1CQ13936 2221 aa21.68■■□□□ 1.06
COL27A1-208ENST00000494780 A0A088AWK7 358 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 CLDN4O14493 209 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 PEX1O43933 1283 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 ZNF10P21506 573 aaPredicted RBP21.67■■□□□ 1.06
COL27A1-208ENST00000494780 PTGS2P35354 604 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 RAB38P57729 211 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 DR1Q01658 176 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 RUNX2Q13950 521 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 SLBPQ14493 270 aaKnown RBP eCLIP21.67■■□□□ 1.06
COL27A1-208ENST00000494780 TSNQ15631 228 aaKnown RBP21.67■■□□□ 1.06
COL27A1-208ENST00000494780 C3P1Q6ZMU1 363 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 ANKMY2Q8IV38 441 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 CYP4Z2PQ8N1L4 340 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 C16orf52Q8NHV5 167 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 ANKRD49Q8WVL7 239 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 RHBDF1Q96CC6 855 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 MS4A6EQ96DS6 147 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 CAPS2Q9BXY5 557 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 PITHD1Q9GZP4 211 aaPredicted RBP21.67■■□□□ 1.06
COL27A1-208ENST00000494780 NT5DC2Q9H857 520 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 POPDC3Q9HBV1 291 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 PNO1Q9NRX1 252 aaKnown RBP21.67■■□□□ 1.06
COL27A1-208ENST00000494780 MOCS1Q9NZB8 636 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 PPT2Q9UMR5 302 aa21.67■■□□□ 1.06
COL27A1-208ENST00000494780 LRIT2A6NDA9 550 aa21.66■■□□□ 1.06
COL27A1-208ENST00000494780 SYNDIG1LA6NDD5 238 aa21.66■■□□□ 1.06
COL27A1-208ENST00000494780 ERI3O43414 337 aaKnown RBP21.66■■□□□ 1.06
COL27A1-208ENST00000494780 ITGA10O75578 1167 aa21.66■■□□□ 1.06
COL27A1-208ENST00000494780 GDF5P43026 501 aa21.66■■□□□ 1.06
COL27A1-208ENST00000494780 ILF2Q12905 390 aaKnown RBP21.66■■□□□ 1.06
COL27A1-208ENST00000494780 KLHL7Q8IXQ5 586 aa21.66■■□□□ 1.06
COL27A1-208ENST00000494780 ZNF595Q8IYB9 648 aa21.66■■□□□ 1.06
COL27A1-208ENST00000494780 KRT78Q8N1N4 520 aa21.66■■□□□ 1.06
COL27A1-208ENST00000494780 ZFP62Q8NB50 900 aaPredicted RBP21.66■■□□□ 1.06
COL27A1-208ENST00000494780 FAM57AQ8TBR7 257 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms