RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 C19orf43Q9BQ61 176 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 DNMT3LQ9UJW3 386 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 PRG3Q9Y2Y8 225 aaPredicted RBP14.72□□□□□ -0.05
SDF4-207ENST00000494748 PRAMEF33A0A0G2JMD5 474 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 ICMTO60725 284 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 PRAMEF10O60809 474 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 ITPKAP23677 461 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 MYL9P24844 172 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 SLC11A2P49281 568 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 VEPH1Q14D04 833 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 TEAD4Q15561 434 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 GDPGP1Q6ZNW5 385 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 KRT73Q86Y46 540 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 NPAS3Q8IXF0 933 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 NLGN4YQ8NFZ3 816 aaPredicted RBP14.72□□□□□ -0.05
SDF4-207ENST00000494748 CREB3L4Q8TEY5 395 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 SLC25A46Q96AG3 418 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 GON7Q9BXV9 100 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 ABCB9Q9NP78 766 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 NDOR1Q9UHB4 597 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 AFF4Q9UHB7 1163 aaKnown RBP14.72□□□□□ -0.05
SDF4-207ENST00000494748 SNX7Q9UNH6 387 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 NINQ8N4C6 2090 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 FAM25AB3EWG3 89 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 FAM25CB3EWG5 89 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 FAM25GB3EWG6 89 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 FAM227AF5H4B4 570 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 STC2O76061 302 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 OPRD1P41143 372 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 HTR2BP41595 481 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 ALDH9A1P49189 494 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 ARMC12Q5T9G4 340 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 GPR26Q8NDV2 337 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 TRPV1Q8NER1 839 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 TTC9Q92623 222 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 RSPO3Q9BXY4 272 aaPredicted RBP14.72□□□□□ -0.05
SDF4-207ENST00000494748 REV1Q9UBZ9 1251 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 STUB1Q9UNE7 303 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 HCN4Q9Y3Q4 1203 aa14.72□□□□□ -0.05
SDF4-207ENST00000494748 FAM157BP0CG42 384 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 CSTF2P33240 577 aaKnown RBP eCLIP14.71□□□□□ -0.05
SDF4-207ENST00000494748 CHIT1Q13231 466 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 TNK1Q13470 666 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 LYPLAL1Q5VWZ2 237 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 FRMPD2BQ6IN97 320 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 ARMCX6Q7L4S7 300 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 MAPKAP1Q9BPZ7 522 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 TTLL2Q9BWV7 592 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 RNF121Q9H920 327 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 RPRD1BQ9NQG5 326 aaKnown RBP14.71□□□□□ -0.05
SDF4-207ENST00000494748 VPS29Q9UBQ0 182 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 CRLS1Q9UJA2 301 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 DOCK6Q96HP0 2047 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 SLC38A8A6NNN8 435 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 LGI1O95970 557 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 HLA-DMAP28067 261 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 GKP32189 559 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 OR1G1P47890 313 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 DGKEP52429 567 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 CRISP1P54107 249 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 ARPP19P56211 112 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 CDC42P60953 191 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 SCN1BQ07699 218 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 FAPQ12884 760 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 TMEM201Q5SNT2 666 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 PAQR6Q6TCH4 344 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 TSPAN33Q86UF1 283 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 RASGRP3Q8IV61 690 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 AQP11Q8NBQ7 271 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 PIP5K1AQ99755 562 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 GKN1Q9NS71 199 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 SEC14L4Q9UDX3 406 aa14.71□□□□□ -0.05
SDF4-207ENST00000494748 PLXND1Q9Y4D7 1925 aa14.71□□□□□ -0.06
SDF4-207ENST00000494748 PLD2O14939 933 aa14.71□□□□□ -0.06
SDF4-207ENST00000494748 CLEC2LP0C7M8 214 aa14.71□□□□□ -0.06
SDF4-207ENST00000494748 CORO1AP31146 461 aaKnown RBP14.71□□□□□ -0.06
SDF4-207ENST00000494748 ATP5C1P36542 298 aaKnown RBP14.71□□□□□ -0.06
SDF4-207ENST00000494748 RHOAP61586 193 aa14.71□□□□□ -0.06
SDF4-207ENST00000494748 LAMTOR1Q6IAA8 161 aa14.71□□□□□ -0.06
SDF4-207ENST00000494748 XKRXQ6PP77 449 aa14.71□□□□□ -0.06
SDF4-207ENST00000494748 PAMR1Q6UXH9 720 aa14.71□□□□□ -0.06
SDF4-207ENST00000494748 PTCHD4Q6ZW05 846 aa14.71□□□□□ -0.06
SDF4-207ENST00000494748 ALG14Q96F25 216 aa14.71□□□□□ -0.06
SDF4-207ENST00000494748 MTERF1Q99551 399 aaKnown RBP14.71□□□□□ -0.06
SDF4-207ENST00000494748 EXOSC4Q9NPD3 245 aaKnown RBP14.71□□□□□ -0.06
SDF4-207ENST00000494748 KLHL42Q9P2K6 505 aa14.71□□□□□ -0.06
SDF4-207ENST00000494748 CORO2BQ9UQ03 480 aa14.71□□□□□ -0.06
SDF4-207ENST00000494748 ARRDC5A6NEK1 342 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 GFYI3L273 518 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 FFAR1O14842 300 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 COCHO43405 550 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.7□□□□□ -0.06
SDF4-207ENST00000494748 SPHARQ15513 63 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 GLCCI1Q86VQ1 547 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 YIPF7Q8N8F6 280 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 TCF25Q9BQ70 676 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 BBS2Q9BXC9 721 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 GPR62Q9BZJ7 368 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 NMNAT1Q9HAN9 279 aaPredicted RBP14.7□□□□□ -0.06
SDF4-207ENST00000494748 DNAJC11Q9NVH1 559 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms