RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 MLXIPLQ9NP71 852 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 MKKSQ9NPJ1 570 aaPredicted RBP8.29□□□□□ -1.08
ITGB1-217ENST00000494395 SEMA3GQ9NS98 782 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 TMEM216Q9P0N5 145 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 TRPC4Q9UBN4 977 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.29□□□□□ -1.08
ITGB1-217ENST00000494395 RAB21Q9UL25 225 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 V9GYY5 206 aaPredicted RBP8.29□□□□□ -1.08
ITGB1-217ENST00000494395 KALRNO60229 2985 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 PIEZO2Q9H5I5 2752 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 IQANK1A0A1B0GTG1 560 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 A0A1W2PPM1 405 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 ARGFXA6NJG6 315 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 A8MT66 165 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 FOXO6A8MYZ6 492 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 IDSB3KWA1 339 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 STX16-NPEPL1H3BU86 382 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 K7EM74 188 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 SGK494L7N484 410 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 AGPSO00116 658 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 MASP2O00187 686 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 STX16O14662 325 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 DNAJB6O75190 326 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 RDH16O75452 317 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 JRKO75564 520 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 CLEC3AO75596 197 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 BMP10O95393 424 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 CYC1P08574 325 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 RPS17P08708 135 aaKnown RBP8.28□□□□□ -1.08
ITGB1-217ENST00000494395 VSIG8P0DPA2 414 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 GFAPP14136 432 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 ALOX12P18054 663 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 ADH6P28332 368 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 EEF1DP29692 281 aaKnown RBP8.28□□□□□ -1.08
ITGB1-217ENST00000494395 OTX2P32243 289 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 MAP2K3P46734 347 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 AVPR1BP47901 424 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 SOX8P57073 446 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 IRF8Q02556 426 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 OCA2Q04671 838 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 RGS1Q08116 209 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 XKR6Q5GH73 641 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 TOR1AIP1Q5JTV8 583 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 ZNF787Q6DD87 383 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 GRHL2Q6ISB3 625 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 TCTN3Q6NUS6 607 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 EMBQ6PCB8 327 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 TMEM205Q6UW68 189 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 KIRREL2Q6UWL6 708 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 GOLGA7Q7Z5G4 137 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 KRT78Q8N1N4 520 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 MREGQ8N565 214 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 TEX9Q8N6V9 391 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 PTGR2Q8N8N7 351 aaPredicted RBP8.28□□□□□ -1.08
ITGB1-217ENST00000494395 L3MBTL4Q8NA19 623 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 OR11G2Q8NGC1 345 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 ZNF473Q8WTR7 871 aaKnown RBP8.28□□□□□ -1.08
ITGB1-217ENST00000494395 MIEF2Q96C03 454 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 PHF21BQ96EK2 531 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 QRFPRQ96P65 431 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 CCDC77Q9BR77 488 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 CRB3Q9BUF7 120 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 PARD6BQ9BYG5 372 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 VN1R1Q9GZP7 353 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 SLC25A18Q9H1K4 315 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 ANKHQ9HCJ1 492 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 ZBTB26Q9HCK0 441 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 P4HTMQ9NXG6 502 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 CPSF2Q9P2I0 782 aaKnown RBP8.28□□□□□ -1.08
ITGB1-217ENST00000494395 TBK1Q9UHD2 729 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 C3orf18Q9UK00 162 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 PCTPQ9UKL6 214 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 TMCO1Q9UM00 188 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 NAALAD2Q9Y3Q0 740 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 TSC22D4Q9Y3Q8 395 aa8.28□□□□□ -1.08
ITGB1-217ENST00000494395 PCDHGA9Q9Y5G4 932 aaKnown RBP8.28□□□□□ -1.08
ITGB1-217ENST00000494395 TLN1Q9Y490 2541 aaKnown RBP8.27□□□□□ -1.09
ITGB1-217ENST00000494395 LOC102723996A0A087X1L8 192 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 LRIT2A6NDA9 550 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 ZNF860A6NHJ4 632 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 MKRN2OSH3BPM6 223 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 GOLGA8RI6L899 631 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 OR7A17O14581 309 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 UGDHO60701 494 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 CDH16O75309 829 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 H2AFYO75367 372 aaKnown RBP8.27□□□□□ -1.09
ITGB1-217ENST00000494395 IGHEP01854 428 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 GSTA1P08263 222 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 SFTPCP11686 197 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 ADH7P40394 386 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 HNF4AP41235 474 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 XCR1P46094 333 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 SLCO1A2P46721 670 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 ST13P50502 369 aaKnown RBP8.27□□□□□ -1.09
ITGB1-217ENST00000494395 RRADP55042 308 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 TRAF3Q13114 568 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 LAPTM5Q13571 262 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 GTF2H2Q13888 395 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 DEFB134Q4QY38 66 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 DCAF10Q5QP82 559 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms