RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 DCDC1P59894 354 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 SEC61GP60059 68 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 SNRPNP63162 240 aaKnown RBP4.03□□□□□ -1.76
BRCA1-220ENST00000492859 ZNF45Q02386 682 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 OCA2Q04671 838 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 PMPCAQ10713 525 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 PPP1R8Q12972 351 aaKnown RBP4.03□□□□□ -1.76
BRCA1-220ENST00000492859 AQP6Q13520 282 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 RIN1Q13671 783 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 TPSAB1Q15661 275 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 TPD52L1Q16890 204 aaPredicted RBP4.03□□□□□ -1.76
BRCA1-220ENST00000492859 EXOC3L2Q2M3D2 409 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 DPCR1Q3MIW9 517 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 GXYLT1Q4G148 440 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 DCAF6Q58WW2 860 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 XKR6Q5GH73 641 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 DDI2Q5TDH0 399 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 NT5DC1Q5TFE4 455 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 ZNF691Q5VV52 312 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 TTC23Q5W5X9 447 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 PAPD7Q5XG87 772 aaKnown RBP4.03□□□□□ -1.76
BRCA1-220ENST00000492859 SEL1L3Q68CR1 1132 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 KCTD16Q68DU8 428 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 KRT39Q6A163 491 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 PLAG1Q6DJT9 500 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 VWA1Q6PCB0 445 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 CFAP77Q6ZQR2 320 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 DPPA4Q7L190 304 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 ARCQ7LC44 396 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 GPRIN1Q7Z2K8 1008 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 PIGWQ7Z7B1 504 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 ADGRD2Q7Z7M1 963 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 SFR1Q86XK3 245 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 WFDC3Q8IUB2 231 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 DCUN1D3Q8IWE4 304 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 AQP12AQ8IXF9 295 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 FBXL6Q8N531 539 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 SIRT6Q8N6T7 355 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 CCDC185Q8N715 623 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 GATSQ8NAP1 163 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 SYT14Q8NB59 555 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 ADPRHL1Q8NDY3 354 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 PROKR2Q8NFJ6 384 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 OR2L5Q8NG80 312 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 OR5M8Q8NGP6 311 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 OR2L8Q8NGY9 312 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 OR2V1Q8NHB1 315 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 NEK7Q8TDX7 302 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 FAM172AQ8WUF8 416 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 MAFIPQ8WZ33 124 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 AP3S1Q92572 193 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 FCGR1BQ92637 280 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 HOXB13Q92826 284 aaPredicted RBP4.03□□□□□ -1.76
BRCA1-220ENST00000492859 DAZLQ92904 295 aaKnown RBP4.03□□□□□ -1.76
BRCA1-220ENST00000492859 S100PBPQ96BU1 408 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 CCDC124Q96CT7 223 aaKnown RBP4.03□□□□□ -1.76
BRCA1-220ENST00000492859 MTBPQ96DY7 904 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 HHIPL1Q96JK4 782 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 HEXIM2Q96MH2 286 aaKnown RBP4.03□□□□□ -1.76
BRCA1-220ENST00000492859 TECTBQ96PL2 329 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 ZNF385AQ96PM9 386 aaKnown RBP4.03□□□□□ -1.76
BRCA1-220ENST00000492859 OR2A14Q96R47 310 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 C12orf57Q99622 126 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 KLHDC3Q9BQ90 382 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 DPH2Q9BQC3 489 aaPredicted RBP4.03□□□□□ -1.76
BRCA1-220ENST00000492859 NUDT22Q9BRQ3 303 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 SPATA5L1Q9BVQ7 753 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 C1QTNF7Q9BXJ2 289 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 FOXP1Q9H334 677 aaPredicted RBP4.03□□□□□ -1.76
BRCA1-220ENST00000492859 TMEM231Q9H6L2 316 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 RANBP3Q9H6Z4 567 aaPredicted RBP4.03□□□□□ -1.76
BRCA1-220ENST00000492859 WDR76Q9H967 626 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 LMAN1LQ9HAT1 526 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 HSPB7Q9UBY9 170 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 FBXL7Q9UJT9 491 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 MMACHCQ9Y4U1 282 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 TMEM184BQ9Y519 407 aaPredicted RBP4.03□□□□□ -1.76
BRCA1-220ENST00000492859 PCDHGC4Q9Y5F7 938 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 ENTPD2Q9Y5L3 495 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 ST14Q9Y5Y6 855 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 NPTNQ9Y639 398 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 FKBP7Q9Y680 259 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 USH1CQ9Y6N9 552 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 URGCP-MRPS24S4R325 110 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 RTL9Q8NET4 1388 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 PLEKHG1Q9ULL1 1385 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 WDR97A6NE52 1622 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 ESYT2A0FGR8 921 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 DCDC2BA2VCK2 349 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 OR2W5A6NFC9 320 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 MROH6A6NGR9 719 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 PRR33A8MZF0 331 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 H0YIG0 161 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 MKRN2OSH3BPM6 223 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 hCG_2039718K7EN88 272 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SNAI2O43623 268 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 HS6ST1O60243 411 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 B3GAT3O94766 335 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CER1O95813 267 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 PEX11BO96011 259 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms