RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 HTR1BP28222 390 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 VASPP50552 380 aaPredicted RBP12.32□□□□□ -0.44
PRAME-213ENST00000492657 TPTEP56180 551 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 ZNF763Q0D2J5 394 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 ELP6Q0PNE2 266 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 CNTN1Q12860 1018 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 ELAVL3Q14576 367 aaKnown RBP12.32□□□□□ -0.44
PRAME-213ENST00000492657 Q6ZPB1 254 aaPredicted RBP12.32□□□□□ -0.44
PRAME-213ENST00000492657 VN1R5Q7Z5H4 357 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 ATG16L2Q8NAA4 619 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 ARMC5Q96C12 935 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 MAGED4Q96JG8 741 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 MARCH7Q9H992 704 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 TMA7Q9Y2S6 64 aaKnown RBP12.32□□□□□ -0.44
PRAME-213ENST00000492657 HEATR5BQ9P2D3 2071 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 DNAH14Q0VDD8 3507 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 ANGPTL1O95841 491 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 P2RY2P41231 377 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 IL12RB1P42701 662 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 OR1E2P47887 323 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 GSSP48637 474 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 CYP4F2P78329 520 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 VEZF1Q14119 521 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 ZC3H12BQ5HYM0 836 aaKnown RBP12.32□□□□□ -0.44
PRAME-213ENST00000492657 ANXA8L1Q5VT79 327 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 ERN2Q76MJ5 926 aaKnown RBP12.32□□□□□ -0.44
PRAME-213ENST00000492657 RTL10Q7L3V2 364 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 B3GNT8Q7Z7M8 397 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 LAS2Q8IYD9 372 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 TTC29Q8NA56 475 aaPredicted RBP12.32□□□□□ -0.44
PRAME-213ENST00000492657 FBXO15Q8NCQ5 510 aaPredicted RBP12.32□□□□□ -0.44
PRAME-213ENST00000492657 ABHD11Q8NFV4 315 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 SPPL2AQ8TCT8 520 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 NODALQ96S42 347 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 SLC35A5Q9BS91 424 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 EFCAB11Q9BUY7 163 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 ASPSCR1Q9BZE9 553 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 ZCCHC2Q9C0B9 1178 aaKnown RBP12.32□□□□□ -0.44
PRAME-213ENST00000492657 TMEM245Q9H330 911 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 GPN2Q9H9Y4 310 aaPredicted RBP12.32□□□□□ -0.44
PRAME-213ENST00000492657 THUMPD1Q9NXG2 353 aaKnown RBP12.32□□□□□ -0.44
PRAME-213ENST00000492657 ATP6V1HQ9UI12 483 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 MAP4K5Q9Y4K4 846 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 RTCAO00442 366 aaKnown RBP12.31□□□□□ -0.44
PRAME-213ENST00000492657 SUV39H1O43463 412 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 FURINP09958 794 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 ITGAMP11215 1152 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 PCSK2P16519 638 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 MAP2K4P45985 399 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 ARHGDIAP52565 204 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 RFX4Q33E94 735 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 FBXO46Q6PJ61 603 aaPredicted RBP12.31□□□□□ -0.44
PRAME-213ENST00000492657 CAMKMTQ7Z624 323 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 CCDC71Q8IV32 467 aaPredicted RBP12.31□□□□□ -0.44
PRAME-213ENST00000492657 FGF13Q92913 245 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 METTL2AQ96IZ6 378 aaKnown RBP12.31□□□□□ -0.44
PRAME-213ENST00000492657 ASB16Q96NS5 453 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 ALPK1Q96QP1 1244 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 GABARAPL1Q9H0R8 117 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 OR52A5Q9H2C5 316 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 TRIT1Q9H3H1 467 aaKnown RBP12.31□□□□□ -0.44
PRAME-213ENST00000492657 CCDC177Q9NQR7 707 aaPredicted RBP12.31□□□□□ -0.44
PRAME-213ENST00000492657 DYRK4Q9NR20 520 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 RASSF1Q9NS23 344 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 PRKAG2Q9UGJ0 569 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 TESMINQ9Y4I5 508 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 GMPPBQ9Y5P6 360 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 RNASET2O00584 256 aaKnown RBP12.31□□□□□ -0.44
PRAME-213ENST00000492657 CNOT3O75175 753 aaKnown RBP12.31□□□□□ -0.44
PRAME-213ENST00000492657 PCCBP05166 539 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 EPHX1P07099 455 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 RYKP34925 604 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 HIST2H2ACQ16777 129 aaPredicted RBP12.31□□□□□ -0.44
PRAME-213ENST00000492657 HIST2H2AA3Q6FI13 130 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 CLIP4Q8N3C7 705 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 OR2L2Q8NH16 312 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 TRUB1Q8WWH5 349 aaKnown RBP12.31□□□□□ -0.44
PRAME-213ENST00000492657 STARD8Q92502 1023 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 PPCDCQ96CD2 204 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 REPS1Q96D71 796 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 WDR34Q96EX3 536 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 ALOXE3Q9BYJ1 711 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 REEP1Q9H902 201 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 C2orf16Q68DN1 1984 aa12.31□□□□□ -0.44
PRAME-213ENST00000492657 PRAMEF25A6NGN4 478 aa12.3□□□□□ -0.44
PRAME-213ENST00000492657 IGLON5A6NGN9 336 aa12.3□□□□□ -0.44
PRAME-213ENST00000492657 FOXE1O00358 373 aaPredicted RBP12.3□□□□□ -0.44
PRAME-213ENST00000492657 IL3P08700 152 aa12.3□□□□□ -0.44
PRAME-213ENST00000492657 PCMT1P22061 227 aa12.3□□□□□ -0.44
PRAME-213ENST00000492657 PSMB5P28074 263 aa12.3□□□□□ -0.44
PRAME-213ENST00000492657 RRM2P31350 389 aa12.3□□□□□ -0.44
PRAME-213ENST00000492657 NR4A2P43354 598 aa12.3□□□□□ -0.44
PRAME-213ENST00000492657 GP2P55259 537 aaKnown RBP12.3□□□□□ -0.44
PRAME-213ENST00000492657 SLC13A2Q13183 592 aa12.3□□□□□ -0.44
PRAME-213ENST00000492657 INAVAQ3KP66 663 aa12.3□□□□□ -0.44
PRAME-213ENST00000492657 TMEM236Q5W0B7 351 aa12.3□□□□□ -0.44
PRAME-213ENST00000492657 FAM71E1Q6IPT2 247 aa12.3□□□□□ -0.44
PRAME-213ENST00000492657 HEATR4Q86WZ0 1026 aa12.3□□□□□ -0.44
PRAME-213ENST00000492657 CPA6Q8N4T0 437 aa12.3□□□□□ -0.44
PRAME-213ENST00000492657 C11orf65Q8NCR3 313 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms