RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 SCTRP47872 440 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 HLCSP50747 726 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 HNRNPH2P55795 449 aaKnown RBP8.56□□□□□ -1.04
HDAC3-212ENST00000492407 RIPPLY3P57055 190 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 MLF1P58340 268 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 CDKL1Q00532 357 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 OC90Q02509 493 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-212ENST00000492407 SRSF11Q05519 484 aaKnown RBP8.56□□□□□ -1.04
HDAC3-212ENST00000492407 CSHL1Q14406 222 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 PHKG1Q16816 387 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 RNASEH2BQ5TBB1 312 aaKnown RBP8.56□□□□□ -1.04
HDAC3-212ENST00000492407 FCRLBQ6BAA4 426 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 GALNTL5Q7Z4T8 443 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 ZNF740Q8NDX6 193 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 ZCCHC10Q8TBK6 192 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 ZNF483Q8TF39 744 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-212ENST00000492407 SLCO2A1Q92959 643 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 TMEM125Q96AQ2 219 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 LRRC39Q96DD0 335 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 LINGO1Q96FE5 620 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 PEX11GQ96HA9 241 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 SMIM10Q96HG1 83 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 PTCHD1Q96NR3 888 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 TREX2Q9BQ50 279 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-212ENST00000492407 MACROD1Q9BQ69 325 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 TRIM51Q9BSJ1 452 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 NPLQ9BXD5 320 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-212ENST00000492407 TRIM8Q9BZR9 551 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 SLC6A16Q9GZN6 736 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 PITHD1Q9GZP4 211 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-212ENST00000492407 CDCP1Q9H5V8 836 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 PRDM9Q9NQV7 894 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 RYDENQ9NUL5 291 aaKnown RBP8.56□□□□□ -1.04
HDAC3-212ENST00000492407 NPIPA1Q9UND3 350 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 KLF13Q9Y2Y9 288 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-212ENST00000492407 VWA7Q9Y334 891 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 MMACHCQ9Y4U1 282 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 PDZD2O15018 2839 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 FAM227AF5H4B4 570 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 PDLIM1O00151 329 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 S100BP04271 92 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-212ENST00000492407 SERPINA6P08185 405 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 RNH1P13489 461 aaKnown RBP8.55□□□□□ -1.04
HDAC3-212ENST00000492407 ABOP16442 354 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 POU3F2P20265 443 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-212ENST00000492407 VAMP1P23763 118 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 CASP2P42575 452 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 HNMTP50135 292 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 MNAT1P51948 309 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 CDKN2DP55273 166 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 PMP22Q01453 160 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 DEFB134Q4QY38 66 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 TMEM211Q6ICI0 200 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 FAM45BPQ6NSW5 357 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-212ENST00000492407 DOLPP1Q86YN1 238 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 GPALPP1Q8IXQ4 340 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 ZNF295-AS1Q8N0V1 137 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 NKAPQ8N5F7 415 aaKnown RBP8.55□□□□□ -1.04
HDAC3-212ENST00000492407 NFAM1Q8NET5 270 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-212ENST00000492407 TTLQ8NG68 377 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 C16orf52Q8NHV5 167 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 UHMK1Q8TAS1 419 aaKnown RBP8.55□□□□□ -1.04
HDAC3-212ENST00000492407 FAM45AQ8TCE6 357 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 UTP15Q8TED0 518 aaKnown RBP8.55□□□□□ -1.04
HDAC3-212ENST00000492407 SLC5A11Q8WWX8 675 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 ERP27Q96DN0 273 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 CERS2Q96G23 380 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 OR4K3Q96R72 315 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 DMRTA2Q96SC8 542 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 AIF1LQ9BQI0 150 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 CAPS2Q9BXY5 557 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 ENKD1Q9H0I2 346 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 KLHL1Q9NR64 748 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 TUBA8Q9NY65 449 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-212ENST00000492407 TINAGQ9UJW2 476 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 SH2B3Q9UQQ2 575 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 PPP2R2CQ9Y2T4 447 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 DYRK1BQ9Y463 629 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 ASB1Q9Y576 335 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 KCNE2Q9Y6J6 123 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 CPAMD8Q8IZJ3 1885 aa8.55□□□□□ -1.04
HDAC3-212ENST00000492407 DIDO1Q9BTC0 2240 aaKnown RBP8.54□□□□□ -1.04
HDAC3-212ENST00000492407 FBN2P35556 2912 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 MDC1Q14676 2089 aaKnown RBP8.54□□□□□ -1.04
HDAC3-212ENST00000492407 A0A088AWK7 358 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 A0A1W2PRQ8 180 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 OR2W5A6NFC9 320 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 PSMD12O00232 456 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-212ENST00000492407 DNALI1O14645 258 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-212ENST00000492407 MAN1A2O60476 641 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 STATHP02808 62 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 ZNF888P0CJ79 500 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-212ENST00000492407 ZNF10P21506 573 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-212ENST00000492407 CLCN2P51788 898 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 HSD17B7P56937 341 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 STXBP1P61764 594 aaKnown RBP8.54□□□□□ -1.04
HDAC3-212ENST00000492407 REEP5Q00765 189 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 CBLBQ13191 982 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 PPP1R7Q15435 360 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms