RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 HEMK1Q9Y5R4 338 aaPredicted RBP9□□□□□ -0.97
BRCA1-219ENST00000491747 URB1O60287 2271 aaKnown RBP9□□□□□ -0.97
BRCA1-219ENST00000491747 GSAPA4D1B5 854 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 ANGPT2O15123 496 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 SUPT7LO94864 414 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 GNAO1P09471 354 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 HSD17B1P14061 328 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 FOLR1P15328 257 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 IMPDH1P20839 514 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 SRSF6Q13247 344 aaKnown RBP9□□□□□ -0.97
BRCA1-219ENST00000491747 SLC36A3Q495N2 470 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 SPATS1Q496A3 300 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 TMTC4Q5T4D3 741 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 LCN8Q6JVE9 175 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 C19orf48Q6RUI8 117 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 ZNF248Q8NDW4 579 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 BORCS5Q969J3 196 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 SLC41A2Q96JW4 573 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 OR2A14Q96R47 310 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 GPATCH1Q9BRR8 931 aaKnown RBP9□□□□□ -0.97
BRCA1-219ENST00000491747 DCUN1D5Q9BTE7 237 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 SPRY4Q9C004 299 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 KLHL25Q9H0H3 589 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 TNFRSF12AQ9NP84 129 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 FBXO8Q9NRD0 319 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 ACTR10Q9NZ32 417 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 ACTR3BQ9P1U1 418 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 PCDHGA3Q9Y5H0 932 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 DSPP15924 2871 aaKnown RBP8.99□□□□□ -0.97
BRCA1-219ENST00000491747 PCM1Q15154 2024 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 CROCCQ5TZA2 2017 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 ANKRD11Q6UB99 2663 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-219ENST00000491747 ACACAQ13085 2346 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 EPG5Q9HCE0 2579 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 ATP6AP2A0A1C7CYW4 349 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 TLCD2A6NGC4 264 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 SLC9B1P1A6NJY1 282 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 NME4O00746 187 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 ATP6AP2O75787 350 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 GPIP06744 558 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 CHRM5P08912 532 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-219ENST00000491747 EBLN1P0CF75 366 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 PVRP15151 417 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 ST6GAL1P15907 406 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 TPP2P29144 1249 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-219ENST00000491747 PKLRP30613 574 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 SHMT2P34897 504 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 SLC26A3P40879 764 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 CLN3Q13286 438 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 ZNF829Q3KNS6 432 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-219ENST00000491747 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.99□□□□□ -0.97
BRCA1-219ENST00000491747 CLEC6AQ6EIG7 209 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 ARMC6Q6NXE6 501 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 GALNT7Q86SF2 657 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 DCUN1D3Q8IWE4 304 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 SPACA3Q8IXA5 215 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 FAM20CQ8IXL6 584 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 CPNE9Q8IYJ1 553 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 CLYBLQ8N0X4 340 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 SKA2Q8WVK7 121 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-219ENST00000491747 L3HYPDHQ96EM0 354 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 UBXN10Q96LJ8 280 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 OR6C1Q96RD1 312 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 OLFM1Q99784 485 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 DDA1Q9BW61 102 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 CCDC68Q9H2F9 335 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 GSTO2Q9H4Y5 243 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 GID8Q9NWU2 228 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 ACSL6Q9UKU0 697 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 CDC14AQ9UNH5 594 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 COMMD10Q9Y6G5 202 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 PIPSLA2A3N6 862 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 ARHGEF33A8MVX0 844 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 NR5A2O00482 541 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 DLGAP1O14490 977 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 NOL3O60936 208 aaKnown RBP8.99□□□□□ -0.97
BRCA1-219ENST00000491747 SEC24DO94855 1032 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-219ENST00000491747 UGT2B7P16662 529 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 ZNF28P17035 718 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 GPX3P22352 226 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 DCKP27707 260 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 CD97P48960 835 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 FOXM1Q08050 763 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 DTX1Q86Y01 620 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 SPPL2CQ8IUH8 684 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 EPHX4Q8IUS5 362 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 RASGRP3Q8IV61 690 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 FUNDC1Q8IVP5 155 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 MIER2Q8N344 545 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 SNX31Q8N9S9 440 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 GIPC3Q8TF64 312 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 KCNE4Q8WWG9 221 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 CD180Q99467 661 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 DOK1Q99704 481 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 NPLQ9BXD5 320 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-219ENST00000491747 MUC13Q9H3R2 512 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 SSUH2Q9Y2M2 353 aa8.99□□□□□ -0.97
BRCA1-219ENST00000491747 ITPR1Q14643 2758 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 TEX51A0A1B0GUA7 166 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 C2orf74A8MZ97 194 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms