RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 HNMTP50135 292 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 CDKL1Q00532 357 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 SLC18A2Q05940 514 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 HYAL2Q12891 473 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 CCDC153Q494R4 210 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 HSP90B2PQ58FF3 399 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 TECRLQ5HYJ1 363 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 AGBL2Q5U5Z8 902 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 B3GNTL1Q67FW5 361 aaPredicted RBP11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 THOC6Q86W42 341 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 TCAIMQ8N3R3 496 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 SIRT6Q8N6T7 355 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 ANKRD53Q8N9V6 530 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 CAMKVQ8NCB2 501 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 DNAJB14Q8TBM8 379 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 SLC5A11Q8WWX8 675 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 GPR78Q96P69 363 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 CNOT10Q9H9A5 744 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 LANCL2Q9NS86 450 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 PLA2G3Q9NZ20 509 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 NUDT4Q9NZJ9 180 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 TMEM216Q9P0N5 145 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 PTGFRNQ9P2B2 879 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 MID2Q9UJV3 735 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 TMCO1Q9UM00 188 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 SLC22A14Q9Y267 594 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 NAALAD2Q9Y3Q0 740 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 ACTL7BQ9Y614 415 aa11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 COPG1Q9Y678 874 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-206ENST00000491668 SCN2AQ99250 2005 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 NOTCH2Q04721 2471 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 E2F3O00716 465 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 NDUFS4O43181 175 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 GALR3O60755 368 aaPredicted RBP11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 SASH3O75995 380 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 SEC24DO94855 1032 aaPredicted RBP11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 CXCR2P25025 360 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 VARSP26640 1264 aaKnown RBP11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 GDF5P43026 501 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 TSFMP43897 325 aaKnown RBP11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 SLC6A12P48065 614 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 MAGOHP61326 146 aaKnown RBP11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 REEP5Q00765 189 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 RHAGQ02094 409 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 PWP1Q13610 501 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 ZNF169Q14929 603 aaPredicted RBP11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 PFKFB4Q16877 469 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 FHL5Q5TD97 284 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 IRAK1BP1Q5VVH5 260 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 HIST2H2BCQ6DN03 193 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 SULT1C3Q6IMI6 304 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 EXOC3L1Q86VI1 746 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 BANPQ8N9N5 519 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 NT5CQ8TCD5 201 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 VPS50Q96JG6 964 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 CNDP1Q96KN2 507 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 ATP6V1G3Q96LB4 118 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 ATOH8Q96SQ7 321 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 RBCK1Q9BYM8 510 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 ANKHQ9HCJ1 492 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 RIC8BQ9NVN3 520 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 ZNF446Q9NWS9 450 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 MKS1Q9NXB0 559 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 SVILO95425 2214 aa11.96□□□□□ -0.49
SEC61A1-206ENST00000491668 PCDH17O14917 1159 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 TAPBPO15533 448 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 ATP8B1O43520 1251 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 CCNT2O60583 730 aaKnown RBP11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 PRAMEF4O60810 478 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 AGFG2O95081 481 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 F10P00742 488 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 SLC35G6P0C7Q6 338 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 SMIM10L1P0DMW3 83 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 MYL2P10916 166 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 GP1BBP13224 206 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 GRK3P35626 688 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 KCNC1P48547 511 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 TNFSF10P50591 281 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 OLR1P78380 273 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 TLR1Q15399 786 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 MINDY4Q4G0A6 757 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 DEFB134Q4QY38 66 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 CDKL4Q5MAI5 379 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 PRAMEF9Q5VWM5 478 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 NXPE4Q6UWF7 544 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 RIPOR1Q6ZS17 1223 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 SH2D5Q6ZV89 423 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 CPEB2Q7Z5Q1 589 aaKnown RBP11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 ANKRD37Q7Z713 158 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 KLHDC8AQ8IYD2 350 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 PDPRQ8NCN5 879 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 PRR7Q8TB68 274 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 GRHL3Q8TE85 626 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 UTP15Q8TED0 518 aaKnown RBP11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 CREB3L4Q8TEY5 395 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 SREK1Q8WXA9 508 aaKnown RBP11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 TSLPQ969D9 159 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 ARL8AQ96BM9 186 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 RHBDF1Q96CC6 855 aa11.95□□□□□ -0.5
SEC61A1-206ENST00000491668 PHF21BQ96EK2 531 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms