RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 CATSPEREQ5SY80 951 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 ANKRD22Q5VYY1 191 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 ACAD11Q709F0 780 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 KIAA1328Q86T90 577 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 ANKRD53Q8N9V6 530 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 PSD4Q8NDX1 1056 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 B3GNT7Q8NFL0 401 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 OR5M3Q8NGP4 307 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 NT5CQ8TCD5 201 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 ALKBH8Q96BT7 664 aaKnown RBP12.3□□□□□ -0.44
USF1-206ENST00000491629 PYCR2Q96C36 320 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 SMIM10Q96HG1 83 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 DOCK7Q96N67 2140 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 POLDIP3Q9BY77 421 aaKnown RBP12.3□□□□□ -0.44
USF1-206ENST00000491629 FAM129AQ9BZQ8 928 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 PCBD2Q9H0N5 130 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 PRDM9Q9NQV7 894 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 PPIEQ9UNP9 301 aaKnown RBP12.3□□□□□ -0.44
USF1-206ENST00000491629 COL6A5A8TX70 2615 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 MED12Q93074 2177 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 ARID1AO14497 2285 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 CTAGE9A4FU28 777 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 PFDN6O15212 129 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 IGHG3P01860 377 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 CELA3AP09093 270 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 HNRNPFP52597 415 aaKnown RBP12.29□□□□□ -0.44
USF1-206ENST00000491629 PGGT1BP53609 377 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 RAB8AP61006 207 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 PPIAP62937 165 aaKnown RBP12.29□□□□□ -0.44
USF1-206ENST00000491629 PPP2R2AP63151 447 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 DHX34Q14147 1143 aaKnown RBP12.29□□□□□ -0.44
USF1-206ENST00000491629 CCNG2Q16589 344 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 SEL1L2Q5TEA6 688 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 DRICH1Q6PGQ1 229 aaPredicted RBP12.29□□□□□ -0.44
USF1-206ENST00000491629 ARSKQ6UWY0 536 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 CLYBLQ8N0X4 340 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 CA13Q8N1Q1 262 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 TMEM156Q8N614 296 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 TMEM52Q8NDY8 209 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 OR2M7Q8NG81 312 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 NCLNQ969V3 563 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 PWWP2AQ96N64 755 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 AARSD1Q9BTE6 412 aaKnown RBP12.29□□□□□ -0.44
USF1-206ENST00000491629 TTTY12Q9BZ98 90 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 RASSF1Q9NS23 344 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 FBXW2Q9UKT8 454 aa12.29□□□□□ -0.44
USF1-206ENST00000491629 TRBC2A0A5B9 178 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 G3V3Y1 287 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 AP3B1O00203 1094 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 ZNF354AO60765 605 aaPredicted RBP12.28□□□□□ -0.44
USF1-206ENST00000491629 OR2J2O76002 312 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 MYO1DO94832 1006 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 OR6B1O95007 311 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 IPO7O95373 1038 aaKnown RBP12.28□□□□□ -0.44
USF1-206ENST00000491629 TUBB4AP04350 444 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 SERPIND1P05546 499 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 DRD2P14416 443 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 FOSL1P15407 271 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 HNF4AP41235 474 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 SCTRP47872 440 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 ZFP36L2P47974 494 aaKnown RBP12.28□□□□□ -0.44
USF1-206ENST00000491629 CLCN2P51788 898 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 CDK16Q00536 496 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 DHX9Q08211 1270 aaKnown RBP12.28□□□□□ -0.44
USF1-206ENST00000491629 ZNF585AQ6P3V2 769 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 Q71RC1 249 aaPredicted RBP12.28□□□□□ -0.44
USF1-206ENST00000491629 STRA8Q7Z7C7 330 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 CDC20BQ86Y33 519 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 SCUBE1Q8IWY4 988 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 OR10Q1Q8NGQ4 319 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 OR56A3Q8NH54 315 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 SREK1Q8WXA9 508 aaKnown RBP12.28□□□□□ -0.44
USF1-206ENST00000491629 SLCO2A1Q92959 643 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 ZNF669Q96BR6 464 aaPredicted RBP12.28□□□□□ -0.44
USF1-206ENST00000491629 SNF8Q96H20 258 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 PDLIM2Q96JY6 352 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 SMC6Q96SB8 1091 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 CNPPD1Q9BV87 410 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 SLC6A16Q9GZN6 736 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 CLEC4MQ9H2X3 399 aaPredicted RBP12.28□□□□□ -0.44
USF1-206ENST00000491629 RHBGQ9H310 441 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 PARVBQ9HBI1 364 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 TIMMDC1Q9NPL8 285 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 CRIM1Q9NZV1 1036 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 VPS9D1Q9Y2B5 631 aa12.28□□□□□ -0.44
USF1-206ENST00000491629 A0A1B0GVC2 190 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 EIF3FO00303 357 aaPredicted RBP12.27□□□□□ -0.45
USF1-206ENST00000491629 RNH1P13489 461 aaKnown RBP12.27□□□□□ -0.45
USF1-206ENST00000491629 GABRB3P28472 473 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 GRK3P35626 688 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 SOX3P41225 446 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 MAGEA5P43359 124 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 MAGEA6P43360 314 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 SSR4P51571 173 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 CCR8P51685 355 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 LTBQ06643 244 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 FOXO1Q12778 655 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 KIF5AQ12840 1032 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 RUNX2Q13950 521 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 TRIP13Q15645 432 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms