RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 TTLQ8NG68 377 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 SUN3Q8TAQ9 357 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 GAL3ST3Q96A11 431 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 WDR34Q96EX3 536 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 QRFPRQ96P65 431 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 EHD1Q9H4M9 534 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 PRDM9Q9NQV7 894 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 ANKRD10Q9NXR5 420 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 CD274Q9NZQ7 290 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 ASB1Q9Y576 335 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 TCRBV16S1A1N1A0A5B0 115 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 ESYT3A0FGR9 886 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 CLGNO14967 610 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 CLEC3AO75596 197 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 STSP08842 583 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 SLC35E2BP0CK96 405 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 COL8A1P27658 744 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 KCNK10P57789 538 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 DOC2AQ14183 400 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 EFTUD2Q15029 972 aaKnown RBP eCLIP16.87■□□□□ 0.292e-22■■■■■ 48.1
HMGN1-219ENST00000491183 ADPRMQ3LIE5 342 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 ZNF766Q5HY98 468 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 MAMDC2Q7Z304 686 aaPredicted RBP16.87■□□□□ 0.29
HMGN1-219ENST00000491183 SNX31Q8N9S9 440 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 DNAJB8Q8NHS0 232 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 CCT6BQ92526 530 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 LRRC1Q9BTT6 524 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 HES7Q9BYE0 225 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 PITHD1Q9GZP4 211 aaPredicted RBP16.87■□□□□ 0.29
HMGN1-219ENST00000491183 CDCP1Q9H5V8 836 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 ALG9Q9H6U8 611 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 CNOT10Q9H9A5 744 aaKnown RBP16.87■□□□□ 0.29
HMGN1-219ENST00000491183 ZDHHC18Q9NUE0 388 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 ABI3Q9P2A4 366 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 RNF112Q9ULX5 631 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 CROCCQ5TZA2 2017 aa16.87■□□□□ 0.29
HMGN1-219ENST00000491183 DOPEY1Q5JWR5 2465 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 ANKDD1BA6NHY2 528 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 A8MUA0 341 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 PSMD12O00232 456 aaPredicted RBP16.86■□□□□ 0.29
HMGN1-219ENST00000491183 ERI3O43414 337 aaKnown RBP16.86■□□□□ 0.29
HMGN1-219ENST00000491183 MYBL2P10244 700 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 TFEBP19484 476 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 GSTM2P28161 218 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 STX2P32856 288 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 PMP22Q01453 160 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 PDK4Q16654 411 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 XKR6Q5GH73 641 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 SPINK14Q6IE38 97 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 RAPH1Q70E73 1250 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 SLC5A8Q8N695 610 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 TMEM52Q8NDY8 209 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 STAG3L4Q8TBR4 150 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 EXT2Q93063 718 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 PTCD3Q96EY7 689 aaKnown RBP16.86■□□□□ 0.29
HMGN1-219ENST00000491183 SEC16BQ96JE7 1060 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 FAR2Q96K12 515 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 ATOH8Q96SQ7 321 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 UTP23Q9BRU9 249 aaKnown RBP16.86■□□□□ 0.29
HMGN1-219ENST00000491183 NPLQ9BXD5 320 aaPredicted RBP16.86■□□□□ 0.29
HMGN1-219ENST00000491183 CD244Q9BZW8 370 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 IGSF5Q9NSI5 407 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 PCDHGB6Q9Y5F9 930 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 CLDN16Q9Y5I7 305 aa16.86■□□□□ 0.29
HMGN1-219ENST00000491183 DIDO1Q9BTC0 2240 aaKnown RBP16.85■□□□□ 0.29
HMGN1-219ENST00000491183 HMX2A2RU54 273 aa16.85■□□□□ 0.29
HMGN1-219ENST00000491183 SAGE2PA6NJ88 616 aa16.85■□□□□ 0.29
HMGN1-219ENST00000491183 GABRR3A8MPY1 467 aa16.85■□□□□ 0.29
HMGN1-219ENST00000491183 TGFBR3LH3BV60 316 aa16.85■□□□□ 0.29
HMGN1-219ENST00000491183 CCNT2O60583 730 aaKnown RBP16.85■□□□□ 0.29
HMGN1-219ENST00000491183 CRYABP02511 175 aaKnown RBP16.85■□□□□ 0.29
HMGN1-219ENST00000491183 HNRNPFP52597 415 aaKnown RBP16.85■□□□□ 0.29
HMGN1-219ENST00000491183 PLA2G16P53816 162 aa16.85■□□□□ 0.29
HMGN1-219ENST00000491183 SLMAPQ14BN4 828 aa16.85■□□□□ 0.29
HMGN1-219ENST00000491183 OR1C1Q15619 314 aa16.85■□□□□ 0.29
HMGN1-219ENST00000491183 ZNF468Q5VIY5 522 aaPredicted RBP16.85■□□□□ 0.29
HMGN1-219ENST00000491183 GFRALQ6UXV0 394 aa16.85■□□□□ 0.29
HMGN1-219ENST00000491183 RPS19BP1Q86WX3 136 aaKnown RBP16.85■□□□□ 0.29
HMGN1-219ENST00000491183 LGI4Q8N135 537 aa16.85■□□□□ 0.29
HMGN1-219ENST00000491183 OR2L5Q8NG80 312 aa16.85■□□□□ 0.29
HMGN1-219ENST00000491183 NXNL1Q96CM4 212 aa16.85■□□□□ 0.29
HMGN1-219ENST00000491183 SCMH1Q96GD3 660 aa16.85■□□□□ 0.29
HMGN1-219ENST00000491183 REXO4Q9GZR2 422 aaKnown RBP16.85■□□□□ 0.29
HMGN1-219ENST00000491183 NMRAL1Q9HBL8 299 aa16.85■□□□□ 0.29
HMGN1-219ENST00000491183 KLHL1Q9NR64 748 aa16.85■□□□□ 0.29
HMGN1-219ENST00000491183 MMACHCQ9Y4U1 282 aa16.85■□□□□ 0.29
HMGN1-219ENST00000491183 NBPF19A0A087WUL8 3843 aa16.84■□□□□ 0.29
HMGN1-219ENST00000491183 NEURL1O76050 574 aa16.84■□□□□ 0.29
HMGN1-219ENST00000491183 TPP2P29144 1249 aaPredicted RBP16.84■□□□□ 0.29
HMGN1-219ENST00000491183 CRABP2P29373 138 aa16.84■□□□□ 0.29
HMGN1-219ENST00000491183 CASP2P42575 452 aa16.84■□□□□ 0.29
HMGN1-219ENST00000491183 RAB38P57729 211 aa16.84■□□□□ 0.29
HMGN1-219ENST00000491183 TAS2R50P59544 299 aa16.84■□□□□ 0.29
HMGN1-219ENST00000491183 CHIT1Q13231 466 aa16.84■□□□□ 0.29
HMGN1-219ENST00000491183 NAB1Q13506 487 aa16.84■□□□□ 0.29
HMGN1-219ENST00000491183 E2F2Q14209 437 aa16.84■□□□□ 0.29
HMGN1-219ENST00000491183 UBAP2Q5T6F2 1119 aaKnown RBP16.84■□□□□ 0.29
HMGN1-219ENST00000491183 C1QL3Q5VWW1 255 aa16.84■□□□□ 0.29
HMGN1-219ENST00000491183 ABHD17CQ6PCB6 329 aa16.84■□□□□ 0.29
HMGN1-219ENST00000491183 TBC1D1Q86TI0 1168 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms