RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 TRIB3Q96RU7 358 aa9.8□□□□□ -0.84
BRD9-209ENST00000490814 GORASP2Q9H8Y8 452 aa9.8□□□□□ -0.84
BRD9-209ENST00000490814 ELOVL2Q9NXB9 296 aa9.8□□□□□ -0.84
BRD9-209ENST00000490814 FBXL12Q9NXK8 326 aa9.8□□□□□ -0.84
BRD9-209ENST00000490814 PFDN2Q9UHV9 154 aa9.8□□□□□ -0.84
BRD9-209ENST00000490814 DLGAP4Q9Y2H0 992 aa9.8□□□□□ -0.84
BRD9-209ENST00000490814 RPH3AQ9Y2J0 694 aaPredicted RBP9.8□□□□□ -0.84
BRD9-209ENST00000490814 Q9Y3F1 56 aa9.8□□□□□ -0.84
BRD9-209ENST00000490814 NAALAD2Q9Y3Q0 740 aa9.8□□□□□ -0.84
BRD9-209ENST00000490814 RALGAPA2Q2PPJ7 1873 aa9.8□□□□□ -0.84
BRD9-209ENST00000490814 IGLV3-10A0A075B6K4 115 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 CIB4A0PJX0 185 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 GRXCR1A8MXD5 290 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 GREM1O60565 184 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 ITPKAP23677 461 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 CORO1AP31146 461 aaKnown RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 GATMP50440 423 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 RPS14P62263 151 aaKnown RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 CREMQ03060 361 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 MVKQ03426 396 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 GPAT3Q53EU6 434 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 XKRXQ6PP77 449 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 PRSS55Q6UWB4 352 aaPredicted RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 SBSNQ6UWP8 590 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 ANKS3Q6ZW76 656 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 MRPL10Q7Z7H8 261 aaKnown RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 TRIM48Q8IWZ4 208 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 ZNF366Q8N895 744 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 KLHL6Q8WZ60 621 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 PYURFQ96I23 114 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 TRNT1Q96Q11 434 aaKnown RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 ZNF416Q9BWM5 594 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 GPR62Q9BZJ7 368 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 SLC6A15Q9H2J7 730 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 BRWD1Q9NSI6 2320 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 COPS3Q9UNS2 423 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 DHRS7Q9Y394 339 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 PCDHGB1Q9Y5G3 927 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 PEX16Q9Y5Y5 336 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 ZNF236Q9UL36 1845 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 DRGXA6NNA5 263 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 K7ERQ8 282 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 ARNTLO00327 626 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 SLC28A1O00337 649 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 NUPL2O15504 423 aaKnown RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 ZNF623O75123 536 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 OR2B3O76000 313 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 IL6P05231 212 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 RPLP0P05388 317 aaKnown RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 SELLP14151 372 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 TACR1P25103 407 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 PTX3P26022 381 aaPredicted RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 PPP3CCP48454 512 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 ZXDBP98169 803 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 MAD2L1Q13257 205 aaPredicted RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 RIN1Q13671 783 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 MAD2L1BPQ15013 274 aaPredicted RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 ALG1LQ6GMV1 187 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 PDE12Q6L8Q7 609 aaKnown RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 RETSATQ6NUM9 610 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 DBX2Q6ZNG2 339 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 PRSS48Q7RTY5 328 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 OR52J3Q8NH60 311 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 ST8SIA4Q92187 359 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 RHBDF1Q96CC6 855 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 FOPNLQ96NB1 174 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 KCNC2Q96PR1 638 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 RERGLQ9H628 205 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 TM9SF3Q9HD45 589 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 PCDHB16Q9NRJ7 776 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 REV1Q9UBZ9 1251 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 MAP1BP46821 2468 aaKnown RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 PLXNB2O15031 1838 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 OR2A25A4D2G3 310 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 CCDC182A6NF36 153 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 CAPN5O15484 640 aaPredicted RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 TLL1O43897 1013 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 APOC1P02654 83 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 C1QCP02747 245 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 DGKAP23743 735 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 CDKN2CP42773 168 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 RPP38P78345 283 aaKnown RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 BOP1Q14137 746 aaKnown RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 GBX1Q14549 363 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 STARD3Q14849 445 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 LRRC73Q5JTD7 316 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 MSRB3Q8IXL7 192 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 ZNF565Q8N9K5 539 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 OR8H1Q8NGG4 311 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 OR52H1Q8NGJ2 320 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 SPPL2AQ8TCT8 520 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 UTP15Q8TED0 518 aaKnown RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 TRIM43Q96BQ3 446 aaPredicted RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 NECTIN4Q96NY8 510 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 ATG10Q9H0Y0 220 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 MMP28Q9H239 520 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 DCAF13Q9NV06 445 aaKnown RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 NUFIP1Q9UHK0 495 aaKnown RBP9.79□□□□□ -0.84
BRD9-209ENST00000490814 PRSS21Q9Y6M0 314 aa9.79□□□□□ -0.84
BRD9-209ENST00000490814 SH3D21A4FU49 640 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms