RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 MYO1DO94832 1006 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 SNRPB2P08579 225 aaKnown RBP18.45■□□□□ 0.54
SREBF1-216ENST00000490796 NCF1P14598 390 aaPredicted RBP18.45■□□□□ 0.54
SREBF1-216ENST00000490796 NME2P22392 152 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 HLCSP50747 726 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 CLCN2P51788 898 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 HYAL2Q12891 473 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 SLBPQ14493 270 aaKnown RBP eCLIP18.45■□□□□ 0.54
SREBF1-216ENST00000490796 ZNF630Q2M218 657 aaPredicted RBP18.45■□□□□ 0.54
SREBF1-216ENST00000490796 ZNF468Q5VIY5 522 aaPredicted RBP18.45■□□□□ 0.54
SREBF1-216ENST00000490796 TMIGD1Q6UXZ0 262 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 CAPN12Q6ZSI9 719 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.45■□□□□ 0.54
SREBF1-216ENST00000490796 ZBED8Q8IZ13 594 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 TMEM156Q8N614 296 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 CREB3L4Q8TEY5 395 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 CDKL2Q92772 493 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 TSPAN17Q96FV3 270 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 NAPGQ99747 312 aaPredicted RBP18.45■□□□□ 0.54
SREBF1-216ENST00000490796 CCDC77Q9BR77 488 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 CNOT10Q9H9A5 744 aaKnown RBP18.45■□□□□ 0.54
SREBF1-216ENST00000490796 POPDC3Q9HBV1 291 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 NECTIN3Q9NQS3 549 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 PNO1Q9NRX1 252 aaKnown RBP18.45■□□□□ 0.54
SREBF1-216ENST00000490796 WWOXQ9NZC7 414 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 FBXW2Q9UKT8 454 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 KLF13Q9Y2Y9 288 aaPredicted RBP18.45■□□□□ 0.54
SREBF1-216ENST00000490796 A0A0G2JN53 185 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 TRBV11-1A0A0K0K1C0 115 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 CTAGE15A4D2H0 777 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 ANKDD1BA6NHY2 528 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 PRRG2O14669 202 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 CLGNO14967 610 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 ERI3O43414 337 aaKnown RBP18.44■□□□□ 0.54
SREBF1-216ENST00000490796 B3GALT2O43825 422 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 SMIM10L1P0DMW3 83 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 GSTM2P28161 218 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 PTGER4P35408 488 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 GDF5P43026 501 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 SLC13A2Q13183 592 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 FASTKD3Q14CZ7 662 aaKnown RBP18.44■□□□□ 0.54
SREBF1-216ENST00000490796 GDF7Q7Z4P5 450 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 CTAGE6Q86UF2 777 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 CREG2Q8IUH2 290 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 TCAIMQ8N3R3 496 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 CPSF7Q8N684 471 aaKnown RBP18.44■□□□□ 0.54
SREBF1-216ENST00000490796 POGLUT1Q8NBL1 392 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 BBOF1Q8ND07 529 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 B3GNT7Q8NFL0 401 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 RHBDF1Q96CC6 855 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 SMIM10Q96HG1 83 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 NPLQ9BXD5 320 aaPredicted RBP18.44■□□□□ 0.54
SREBF1-216ENST00000490796 COPS7BQ9H9Q2 264 aaPredicted RBP18.44■□□□□ 0.54
SREBF1-216ENST00000490796 GRPEL1Q9HAV7 217 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 PRTFDC1Q9NRG1 225 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 MOCS1Q9NZB8 636 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 ZNF835Q9Y2P0 537 aa18.44■□□□□ 0.54
SREBF1-216ENST00000490796 IGKV3D-11A0A0A0MRZ8 115 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 KLRC4-KLRK1H3BQV0 150 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 TFECO14948 347 aaPredicted RBP18.43■□□□□ 0.54
SREBF1-216ENST00000490796 AGAP20933 346 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 TRHRP34981 398 aaPredicted RBP18.43■□□□□ 0.54
SREBF1-216ENST00000490796 ADORA2A-AS1P86434 159 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 POU4F1Q01851 419 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 RCN2Q14257 317 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 Q6ZPB1 254 aaPredicted RBP18.43■□□□□ 0.54
SREBF1-216ENST00000490796 SLCO4C1Q6ZQN7 724 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 CEP97Q8IW35 865 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 KLHDC8AQ8IYD2 350 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 SNX31Q8N9S9 440 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 NFAM1Q8NET5 270 aaPredicted RBP18.43■□□□□ 0.54
SREBF1-216ENST00000490796 ADAMTS18Q8TE60 1221 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 PYROXD1Q8WU10 500 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 ANKRD49Q8WVL7 239 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 PDLIM2Q96JY6 352 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 KRT12Q99456 494 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 KCNF1Q9H3M0 494 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 GPRC5BQ9NZH0 403 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 MEMO1Q9Y316 297 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 SNX24Q9Y343 169 aa18.43■□□□□ 0.54
SREBF1-216ENST00000490796 PLA2G16P53816 162 aa18.42■□□□□ 0.54
SREBF1-216ENST00000490796 HSD17B7P56937 341 aa18.42■□□□□ 0.54
SREBF1-216ENST00000490796 RAB38P57729 211 aa18.42■□□□□ 0.54
SREBF1-216ENST00000490796 TGM3Q08188 693 aa18.42■□□□□ 0.54
SREBF1-216ENST00000490796 GTF3C1Q12789 2109 aa18.42■□□□□ 0.54
SREBF1-216ENST00000490796 CALCOCO2Q13137 446 aa18.42■□□□□ 0.54
SREBF1-216ENST00000490796 TERF2Q15554 542 aa18.42■□□□□ 0.54
SREBF1-216ENST00000490796 TGFBIQ15582 683 aa18.42■□□□□ 0.54
SREBF1-216ENST00000490796 C18orf21Q32NC0 220 aaPredicted RBP18.42■□□□□ 0.54
SREBF1-216ENST00000490796 TRIM40Q6P9F5 258 aa18.42■□□□□ 0.54
SREBF1-216ENST00000490796 GPSM1Q86YR5 675 aa18.42■□□□□ 0.54
SREBF1-216ENST00000490796 SIAH3Q8IW03 269 aa18.42■□□□□ 0.54
SREBF1-216ENST00000490796 CYP4Z2PQ8N1L4 340 aa18.42■□□□□ 0.54
SREBF1-216ENST00000490796 VMP1Q96GC9 406 aa18.42■□□□□ 0.54
SREBF1-216ENST00000490796 SEC16BQ96JE7 1060 aa18.42■□□□□ 0.54
SREBF1-216ENST00000490796 PITHD1Q9GZP4 211 aaPredicted RBP18.42■□□□□ 0.54
SREBF1-216ENST00000490796 DERL2Q9GZP9 239 aa18.42■□□□□ 0.54
SREBF1-216ENST00000490796 TRIM45Q9H8W5 580 aaPredicted RBP18.42■□□□□ 0.54
SREBF1-216ENST00000490796 DNAJC11Q9NVH1 559 aa18.42■□□□□ 0.54
SREBF1-216ENST00000490796 RNF14Q9UBS8 474 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms