RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 SUPT3HO75486 399 aa29.44■■■□□ 2.3
LDB1-204ENST00000490751 EDN3P14138 238 aa29.44■■■□□ 2.3
LDB1-204ENST00000490751 EPORP19235 508 aa29.44■■■□□ 2.3
LDB1-204ENST00000490751 CD22P20273 847 aa29.44■■■□□ 2.3
LDB1-204ENST00000490751 MAOAP21397 527 aa29.44■■■□□ 2.3
LDB1-204ENST00000490751 INAQ16352 499 aa29.44■■■□□ 2.3
LDB1-204ENST00000490751 MROH9Q5TGP6 573 aa29.44■■■□□ 2.3
LDB1-204ENST00000490751 CRLF3Q8IUI8 442 aa29.44■■■□□ 2.3
LDB1-204ENST00000490751 CYP4X1Q8N118 509 aa29.44■■■□□ 2.3
LDB1-204ENST00000490751 BEST3Q8N1M1 668 aa29.44■■■□□ 2.3
LDB1-204ENST00000490751 MMGT1Q8N4V1 131 aa29.44■■■□□ 2.3
LDB1-204ENST00000490751 SUN3Q8TAQ9 357 aa29.44■■■□□ 2.3
LDB1-204ENST00000490751 NXNL1Q96CM4 212 aa29.44■■■□□ 2.3
LDB1-204ENST00000490751 TAAR6Q96RI8 345 aa29.44■■■□□ 2.3
LDB1-204ENST00000490751 PRDM9Q9NQV7 894 aa29.44■■■□□ 2.3
LDB1-204ENST00000490751 NINJ2Q9NZG7 142 aa29.44■■■□□ 2.3
LDB1-204ENST00000490751 MTRF1LQ9UGC7 380 aaKnown RBP29.44■■■□□ 2.3
LDB1-204ENST00000490751 ERRFI1Q9UJM3 462 aaPredicted RBP29.44■■■□□ 2.3
LDB1-204ENST00000490751 ZNF490Q9ULM2 529 aaPredicted RBP29.44■■■□□ 2.3
LDB1-204ENST00000490751 ACOT9Q9Y305 439 aa29.44■■■□□ 2.3
LDB1-204ENST00000490751 SPTAN1Q13813 2472 aaKnown RBP29.44■■■□□ 2.3
LDB1-204ENST00000490751 UBXN8O00124 270 aa29.43■■■□□ 2.3
LDB1-204ENST00000490751 TBX6O95947 436 aaPredicted RBP29.43■■■□□ 2.3
LDB1-204ENST00000490751 PHBP35232 272 aa29.43■■■□□ 2.3
LDB1-204ENST00000490751 IRF8Q02556 426 aa29.43■■■□□ 2.3
LDB1-204ENST00000490751 UAP1Q16222 522 aaPredicted RBP29.43■■■□□ 2.3
LDB1-204ENST00000490751 KCTD4Q8WVF5 259 aa29.43■■■□□ 2.3
LDB1-204ENST00000490751 NPAS2Q99743 824 aa29.43■■■□□ 2.3
LDB1-204ENST00000490751 SLX1AQ9BQ83 275 aa29.43■■■□□ 2.3
LDB1-204ENST00000490751 NECTIN3Q9NQS3 549 aa29.43■■■□□ 2.3
LDB1-204ENST00000490751 DMGDHQ9UI17 866 aaKnown RBP29.43■■■□□ 2.3
LDB1-204ENST00000490751 IGKV3D-11A0A0A0MRZ8 115 aa29.42■■■□□ 2.3
LDB1-204ENST00000490751 PRAMEF2O60811 474 aa29.42■■■□□ 2.3
LDB1-204ENST00000490751 IRF9Q00978 393 aa29.42■■■□□ 2.3
LDB1-204ENST00000490751 CHIT1Q13231 466 aa29.42■■■□□ 2.3
LDB1-204ENST00000490751 RUNX2Q13950 521 aa29.42■■■□□ 2.3
LDB1-204ENST00000490751 MEP1AQ16819 746 aa29.42■■■□□ 2.3
LDB1-204ENST00000490751 ADPRMQ3LIE5 342 aa29.42■■■□□ 2.3
LDB1-204ENST00000490751 PAGE2BQ5JRK9 111 aa29.42■■■□□ 2.3
LDB1-204ENST00000490751 UBAP2Q5T6F2 1119 aaKnown RBP29.42■■■□□ 2.3
LDB1-204ENST00000490751 CENPLQ8N0S6 344 aaPredicted RBP29.42■■■□□ 2.3
LDB1-204ENST00000490751 NOA1Q8NC60 698 aaKnown RBP29.42■■■□□ 2.3
LDB1-204ENST00000490751 OR2L5Q8NG80 312 aa29.42■■■□□ 2.3
LDB1-204ENST00000490751 QRFPRQ96P65 431 aa29.42■■■□□ 2.3
LDB1-204ENST00000490751 NPLQ9BXD5 320 aaPredicted RBP29.42■■■□□ 2.3
LDB1-204ENST00000490751 REXO4Q9GZR2 422 aaKnown RBP29.42■■■□□ 2.3
LDB1-204ENST00000490751 SNX15Q9NRS6 342 aa29.42■■■□□ 2.3
LDB1-204ENST00000490751 ABI3Q9P2A4 366 aa29.42■■■□□ 2.3
LDB1-204ENST00000490751 SVILO95425 2214 aa29.42■■■□□ 2.3
LDB1-204ENST00000490751 ICE1Q9Y2F5 2266 aa29.42■■■□□ 2.3
LDB1-204ENST00000490751 A0A087X1B8 175 aa29.41■■■□□ 2.3
LDB1-204ENST00000490751 A0A088AWK7 358 aa29.41■■■□□ 2.3
LDB1-204ENST00000490751 TCRBV16S1A1N1A0A5B0 115 aa29.41■■■□□ 2.3
LDB1-204ENST00000490751 HMX2A2RU54 273 aa29.41■■■□□ 2.3
LDB1-204ENST00000490751 DDAH2O95865 285 aa29.41■■■□□ 2.3
LDB1-204ENST00000490751 C2P06681 752 aa29.41■■■□□ 2.3
LDB1-204ENST00000490751 ZNF10P21506 573 aaPredicted RBP29.41■■■□□ 2.3
LDB1-204ENST00000490751 HPDP32754 393 aaPredicted RBP29.41■■■□□ 2.3
LDB1-204ENST00000490751 PLA2G16P53816 162 aa29.41■■■□□ 2.3
LDB1-204ENST00000490751 TAS2R50P59544 299 aa29.41■■■□□ 2.3
LDB1-204ENST00000490751 LAPTM5Q13571 262 aa29.41■■■□□ 2.3
LDB1-204ENST00000490751 TRIM40Q6P9F5 258 aa29.41■■■□□ 2.3
LDB1-204ENST00000490751 CEP128Q6ZU80 1094 aa29.41■■■□□ 2.3
LDB1-204ENST00000490751 SLC5A8Q8N695 610 aa29.41■■■□□ 2.3
LDB1-204ENST00000490751 UBTD2Q8WUN7 234 aa29.41■■■□□ 2.3
LDB1-204ENST00000490751 SLC5A6Q9Y289 635 aa29.41■■■□□ 2.3
LDB1-204ENST00000490751 SPTBN1Q01082 2364 aaKnown RBP29.41■■■□□ 2.3
LDB1-204ENST00000490751 SAGE2PA6NJ88 616 aa29.4■■■□□ 2.3
LDB1-204ENST00000490751 B3GALT2O43825 422 aa29.4■■■□□ 2.3
LDB1-204ENST00000490751 MAN1A2O60476 641 aa29.4■■■□□ 2.3
LDB1-204ENST00000490751 MYBL2P10244 700 aa29.4■■■□□ 2.3
LDB1-204ENST00000490751 TBCCQ15814 346 aa29.4■■■□□ 2.3
LDB1-204ENST00000490751 ZNF324BQ6AW86 544 aaPredicted RBP29.4■■■□□ 2.3
LDB1-204ENST00000490751 CCDC91Q7Z6B0 441 aa29.4■■■□□ 2.3
LDB1-204ENST00000490751 ZGRF1Q86YA3 2104 aa29.4■■■□□ 2.3
LDB1-204ENST00000490751 ARMC2Q8NEN0 867 aa29.4■■■□□ 2.3
LDB1-204ENST00000490751 ELP5Q8TE02 316 aa29.4■■■□□ 2.3
LDB1-204ENST00000490751 ACSS3Q9H6R3 686 aa29.4■■■□□ 2.3
LDB1-204ENST00000490751 OPTCQ9UBM4 332 aa29.4■■■□□ 2.3
LDB1-204ENST00000490751 MMACHCQ9Y4U1 282 aa29.4■■■□□ 2.3
LDB1-204ENST00000490751 K7EPI3 171 aa29.39■■■□□ 2.3
LDB1-204ENST00000490751 ST13P50502 369 aaKnown RBP29.39■■■□□ 2.3
LDB1-204ENST00000490751 RAB38P57729 211 aa29.39■■■□□ 2.3
LDB1-204ENST00000490751 TUBA3CQ13748 450 aa29.39■■■□□ 2.3
LDB1-204ENST00000490751 HIST2H2ACQ16777 129 aaPredicted RBP29.39■■■□□ 2.3
LDB1-204ENST00000490751 FAM83EQ2M2I3 478 aa29.39■■■□□ 2.3
LDB1-204ENST00000490751 HIST2H2AA3Q6FI13 130 aa29.39■■■□□ 2.3
LDB1-204ENST00000490751 ABHD17CQ6PCB6 329 aa29.39■■■□□ 2.3
LDB1-204ENST00000490751 TUBA3EQ6PEY2 450 aa29.39■■■□□ 2.3
LDB1-204ENST00000490751 RELL1Q8IUW5 271 aa29.39■■■□□ 2.3
LDB1-204ENST00000490751 KIF2BQ8N4N8 673 aa29.39■■■□□ 2.3
LDB1-204ENST00000490751 MNS1Q8NEH6 495 aa29.39■■■□□ 2.3
LDB1-204ENST00000490751 NR4A3Q92570 626 aa29.39■■■□□ 2.3
LDB1-204ENST00000490751 CDC42EP4Q9H3Q1 356 aaKnown RBP29.39■■■□□ 2.3
LDB1-204ENST00000490751 COPS7BQ9H9Q2 264 aaPredicted RBP29.39■■■□□ 2.3
LDB1-204ENST00000490751 POLEQ07864 2286 aa29.39■■■□□ 2.3
LDB1-204ENST00000490751 A8MUA0 341 aa29.38■■■□□ 2.29
LDB1-204ENST00000490751 RASAL1O95294 804 aa29.38■■■□□ 2.29
LDB1-204ENST00000490751 LDLRP01130 860 aa29.38■■■□□ 2.29
LDB1-204ENST00000490751 MTHFD2P13995 350 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms