RNA–Protein interactions for RNA: ENST00000490564.1

NINJ1-205, Transcript of ninjurin 1, humanhuman

TSL 1 (best)

Gene NINJ1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-205ENST00000490564 QRFPRQ96P65 431 aa9.83□□□□□ -0.84
NINJ1-205ENST00000490564 REXO4Q9GZR2 422 aaKnown RBP9.83□□□□□ -0.84
NINJ1-205ENST00000490564 VPS11Q9H270 941 aa9.83□□□□□ -0.84
NINJ1-205ENST00000490564 NFU1Q9UMS0 254 aa9.83□□□□□ -0.84
NINJ1-205ENST00000490564 VPS4AQ9UN37 437 aa9.83□□□□□ -0.84
NINJ1-205ENST00000490564 IKBKGQ9Y6K9 419 aa9.83□□□□□ -0.84
NINJ1-205ENST00000490564 USP9XQ93008 2570 aaPredicted RBP9.82□□□□□ -0.84
NINJ1-205ENST00000490564 A0A088AWK7 358 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 IGKV3D-11A0A0A0MRZ8 115 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 POC1B-GALNT4F8VUJ3 575 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 PSMD12O00232 456 aaPredicted RBP9.82□□□□□ -0.84
NINJ1-205ENST00000490564 B4GALT2O60909 372 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 KRT38O76015 456 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 COL6A2P12110 1019 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 RNH1P13489 461 aaKnown RBP9.82□□□□□ -0.84
NINJ1-205ENST00000490564 GFAPP14136 432 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 EPB42P16452 691 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 ZNF10P21506 573 aaPredicted RBP9.82□□□□□ -0.84
NINJ1-205ENST00000490564 GNLYP22749 145 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 SERPINB1P30740 379 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 UQCRFS1P47985 274 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 BTG2P78543 158 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 RUNX2Q13950 521 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 PCBP2Q15366 365 aaKnown RBP eCLIP9.82□□□□□ -0.84
NINJ1-205ENST00000490564 TLR1Q15399 786 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 BTBD16Q32M84 506 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 GRHL2Q6ISB3 625 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 H3F3CQ6NXT2 135 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 RPUSD3Q6P087 351 aaKnown RBP9.82□□□□□ -0.84
NINJ1-205ENST00000490564 METTL2BQ6P1Q9 378 aaKnown RBP9.82□□□□□ -0.84
NINJ1-205ENST00000490564 TRIM40Q6P9F5 258 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 PAPD4Q6PIY7 484 aaKnown RBP9.82□□□□□ -0.84
NINJ1-205ENST00000490564 TRMT10CQ7L0Y3 403 aaKnown RBP9.82□□□□□ -0.84
NINJ1-205ENST00000490564 LAS2Q8IYD9 372 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 CISD2Q8N5K1 135 aaKnown RBP9.82□□□□□ -0.84
NINJ1-205ENST00000490564 CATSPER1Q8NEC5 780 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 UHMK1Q8TAS1 419 aaKnown RBP9.82□□□□□ -0.84
NINJ1-205ENST00000490564 ADAMTS18Q8TE60 1221 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 ZNF473Q8WTR7 871 aaKnown RBP9.82□□□□□ -0.84
NINJ1-205ENST00000490564 HAS2Q92819 552 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 UBE2E3Q969T4 207 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 C19orf60Q96EN9 201 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 CNDP1Q96KN2 507 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 SERINC2Q96SA4 455 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 LPAR4Q99677 370 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 BARD1Q99728 777 aaKnown RBP9.82□□□□□ -0.84
NINJ1-205ENST00000490564 MS4A8Q9BY19 250 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 SLC29A3Q9BZD2 475 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 RNF32Q9H0A6 362 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 MMP25Q9NPA2 562 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 PRDM9Q9NQV7 894 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 PRDM7Q9NQW5 492 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 ASF1BQ9NVP2 202 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 MMACHCQ9Y4U1 282 aa9.82□□□□□ -0.84
NINJ1-205ENST00000490564 A0A0G2JN53 185 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 EXOC1LA0A1B0GW35 172 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 TCRBV16S1A1N1A0A5B0 115 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 DYTNA2CJ06 578 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 TCP11X1B4DZS4 312 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 FAM227AF5H4B4 570 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 E2F3O00716 465 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 RIPK2O43353 540 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 B3GALT2O43825 422 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 PRMT3O60678 531 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 UGDHO60701 494 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 RBP1P09455 135 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 RHOXF2BP0C7M4 288 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 GCAP28676 217 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 TNFSF10P50591 281 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 PLA2G16P53816 162 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 RAB38P57729 211 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 OR4D2P58180 307 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 SLC26A5P58743 744 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 ARG2P78540 354 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 SRSF1Q07955 248 aaKnown RBP eCLIP9.81□□□□□ -0.846e-7■□□□□ 10.3
NINJ1-205ENST00000490564 ACTN3Q08043 901 aaPredicted RBP9.81□□□□□ -0.84
NINJ1-205ENST00000490564 TGM3Q08188 693 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 UBAP2LQ14157 1087 aaKnown RBP9.81□□□□□ -0.84
NINJ1-205ENST00000490564 PFKFB4Q16877 469 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 TSNAXIP1Q2TAA8 658 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 LIPJQ5W064 366 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 FAM219BQ5XKK7 198 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 MED27Q6P2C8 311 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 ABHD17CQ6PCB6 329 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 ADGRD1Q6QNK2 874 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 SCUBE1Q8IWY4 988 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 TEX9Q8N6V9 391 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 SRFBP1Q8NEF9 429 aaKnown RBP9.81□□□□□ -0.84
NINJ1-205ENST00000490564 PTCHD1Q96NR3 888 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 F2RL3Q96RI0 385 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 RHOXF2Q9BQY4 288 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 TXLNGYQ9BZA5 131 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 KCNK13Q9HB14 408 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 NECTIN3Q9NQS3 549 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 ASH1LQ9NR48 2969 aaKnown RBP9.81□□□□□ -0.84
NINJ1-205ENST00000490564 ZNF358Q9NW07 568 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 PLA2G3Q9NZ20 509 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 MAP10Q9P2G4 905 aa9.81□□□□□ -0.84
NINJ1-205ENST00000490564 CPSF2Q9P2I0 782 aaKnown RBP9.81□□□□□ -0.84
NINJ1-205ENST00000490564 ADGRE2Q9UHX3 823 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms