RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 PPP1R3AQ16821 1122 aa16.61■□□□□ 0.25
YIPF3-208ENST00000490447 RNFT1Q5M7Z0 435 aa16.61■□□□□ 0.25
YIPF3-208ENST00000490447 HP1BP3Q5SSJ5 553 aaPredicted RBP16.61■□□□□ 0.25
YIPF3-208ENST00000490447 CD163Q86VB7 1156 aa16.61■□□□□ 0.25
YIPF3-208ENST00000490447 ZNF227Q86WZ6 799 aa16.61■□□□□ 0.25
YIPF3-208ENST00000490447 SULF2Q8IWU5 870 aa16.61■□□□□ 0.25
YIPF3-208ENST00000490447 ZNF295-AS1Q8N0V1 137 aa16.61■□□□□ 0.25
YIPF3-208ENST00000490447 NFAM1Q8NET5 270 aaPredicted RBP16.61■□□□□ 0.25
YIPF3-208ENST00000490447 TTLQ8NG68 377 aa16.61■□□□□ 0.25
YIPF3-208ENST00000490447 CCT6BQ92526 530 aa16.61■□□□□ 0.25
YIPF3-208ENST00000490447 SPOCK3Q9BQ16 436 aa16.61■□□□□ 0.25
YIPF3-208ENST00000490447 CCDC77Q9BR77 488 aa16.61■□□□□ 0.25
YIPF3-208ENST00000490447 DDX47Q9H0S4 455 aaKnown RBP16.61■□□□□ 0.25
YIPF3-208ENST00000490447 KLHL31Q9H511 634 aa16.61■□□□□ 0.25
YIPF3-208ENST00000490447 PNO1Q9NRX1 252 aaKnown RBP16.61■□□□□ 0.25
YIPF3-208ENST00000490447 CELSR1Q9NYQ6 3014 aa16.61■□□□□ 0.25
YIPF3-208ENST00000490447 PKDREJQ9NTG1 2253 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 A0A088AWK7 358 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 CTAGE15A4D2H0 777 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 NPEPPSL1A6NEC2 478 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 CES2O00748 559 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 PEX1O43933 1283 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 HS6ST1O60243 411 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 H2AFYO75367 372 aaKnown RBP16.6■□□□□ 0.25
YIPF3-208ENST00000490447 ITGA10O75578 1167 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 SMIM10L1P0DMW3 83 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 GNAZP19086 355 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 ZNF10P21506 573 aaPredicted RBP16.6■□□□□ 0.25
YIPF3-208ENST00000490447 RFC3P40938 356 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 KIR3DL1P43629 444 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 BTN3A2P78410 334 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 MORF4L2Q15014 288 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 TRMT10BQ6PF06 316 aaKnown RBP16.6■□□□□ 0.25
YIPF3-208ENST00000490447 CTAGE6Q86UF2 777 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 ARMC10Q8N2F6 343 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 SLC35F6Q8N357 371 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 APCDD1LQ8NCL9 501 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 FAM57AQ8TBR7 257 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 GAL3ST3Q96A11 431 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 LRRC39Q96DD0 335 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 C14orf79Q96F83 325 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 VMP1Q96GC9 406 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 SMIM10Q96HG1 83 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 PDLIM2Q96JY6 352 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 DMRTA2Q96SC8 542 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 IKZF3Q9UKT9 509 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 SNX12Q9UMY4 172 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 MRPS33Q9Y291 106 aaKnown RBP16.6■□□□□ 0.25
YIPF3-208ENST00000490447 OARD1Q9Y530 152 aa16.6■□□□□ 0.25
YIPF3-208ENST00000490447 NCOA6Q14686 2063 aaPredicted RBP16.6■□□□□ 0.25
YIPF3-208ENST00000490447 A0A1B0GTH9 108 aa16.59■□□□□ 0.25
YIPF3-208ENST00000490447 CDC7O00311 574 aa16.59■□□□□ 0.25
YIPF3-208ENST00000490447 CLDN4O14493 209 aa16.59■□□□□ 0.25
YIPF3-208ENST00000490447 WDR47O94967 919 aa16.59■□□□□ 0.25
YIPF3-208ENST00000490447 CAPN3P20807 821 aa16.59■□□□□ 0.25
YIPF3-208ENST00000490447 HPDP32754 393 aaPredicted RBP16.59■□□□□ 0.25
YIPF3-208ENST00000490447 SSR4P51571 173 aa16.59■□□□□ 0.25
YIPF3-208ENST00000490447 CDKL1Q00532 357 aa16.59■□□□□ 0.25
YIPF3-208ENST00000490447 SLC13A2Q13183 592 aa16.59■□□□□ 0.25
YIPF3-208ENST00000490447 MEX3BQ6ZN04 569 aaKnown RBP16.59■□□□□ 0.25
YIPF3-208ENST00000490447 ADAMTSL2Q86TH1 951 aa16.59■□□□□ 0.25
YIPF3-208ENST00000490447 CHERPQ8IWX8 916 aaKnown RBP16.59■□□□□ 0.25
YIPF3-208ENST00000490447 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.59■□□□□ 0.25
YIPF3-208ENST00000490447 CREB3L4Q8TEY5 395 aa16.59■□□□□ 0.25
YIPF3-208ENST00000490447 ANKRD7Q92527 254 aa16.59■□□□□ 0.25
YIPF3-208ENST00000490447 SLCO2A1Q92959 643 aa16.59■□□□□ 0.25
YIPF3-208ENST00000490447 TIMMDC1Q9NPL8 285 aa16.59■□□□□ 0.25
YIPF3-208ENST00000490447 PRTFDC1Q9NRG1 225 aa16.59■□□□□ 0.25
YIPF3-208ENST00000490447 ERVK-11Q9UQG0 969 aa16.59■□□□□ 0.25
YIPF3-208ENST00000490447 A0A0G2JN53 185 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 FAM95CA0A1B0GW59 222 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 SYNDIG1LA6NDD5 238 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 USP27XA6NNY8 438 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 C4orf51C9J302 202 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 FANCGO15287 622 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 ERI3O43414 337 aaKnown RBP16.58■□□□□ 0.24
YIPF3-208ENST00000490447 B3GALT2O43825 422 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 C1GALT1C1LP0DN25 315 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 TFEBP19484 476 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 GSTM2P28161 218 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 HSD17B7P56937 341 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 RIPPLY3P57055 190 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 GPR85P60893 370 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 TLE4Q04727 773 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 SLBPQ14493 270 aaKnown RBP eCLIP16.58■□□□□ 0.24
YIPF3-208ENST00000490447 TMEM211Q6ICI0 200 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 ARHGAP11AQ6P4F7 1023 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 TMIGD1Q6UXZ0 262 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 FGD2Q7Z6J4 655 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 KRT78Q8N1N4 520 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 NCLNQ969V3 563 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 VPS39Q96JC1 886 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 NPLQ9BXD5 320 aaPredicted RBP16.58■□□□□ 0.24
YIPF3-208ENST00000490447 PLAC1Q9HBJ0 212 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 CTNNAL1Q9UBT7 734 aa16.58■□□□□ 0.24
YIPF3-208ENST00000490447 YARS2Q9Y2Z4 477 aaKnown RBP16.58■□□□□ 0.24
YIPF3-208ENST00000490447 ANKDD1BA6NHY2 528 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 A8MVJ9 347 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 ACOT7O00154 380 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 ADAM10O14672 748 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms