RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 AGAP4Q96P64 663 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 MTIF3Q9H2K0 278 aaKnown RBP3.31□□□□□ -1.88
CD46-216ENST00000490278 SPG21Q9NZD8 308 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 RNF215Q9Y6U7 377 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 MYH15Q9Y2K3 1946 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 IGKV3D-15A0A087WSY6 115 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 A0A0A6YYC8 382 aaPredicted RBP3.3□□□□□ -1.88
CD46-216ENST00000490278 I3L1I5 382 aaPredicted RBP3.3□□□□□ -1.88
CD46-216ENST00000490278 TFECO14948 347 aaPredicted RBP3.3□□□□□ -1.88
CD46-216ENST00000490278 LRCH4O75427 683 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 MTRF1O75570 445 aaKnown RBP3.3□□□□□ -1.88
CD46-216ENST00000490278 CGAP01215 116 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 RPLP0P05388 317 aaKnown RBP3.3□□□□□ -1.88
CD46-216ENST00000490278 VCLP18206 1134 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 CEACAM7Q14002 265 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 ZNF776Q68DI1 518 aaPredicted RBP3.3□□□□□ -1.88
CD46-216ENST00000490278 TMEM270Q6UE05 265 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 C3P1Q6ZMU1 363 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 Q6ZVQ6 151 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 RFPL4BQ6ZWI9 263 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 ASPGQ86U10 573 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 UNC45BQ8IWX7 931 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 FAM9BQ8IZU0 186 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 ZNF444Q8N0Y2 327 aaPredicted RBP3.3□□□□□ -1.88
CD46-216ENST00000490278 METTL4Q8N3J2 472 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 OR10G7Q8NGN6 311 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 OR5M9Q8NGP3 310 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 C11orf45Q8TAV5 145 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 GTF3AQ92664 365 aaKnown RBP3.3□□□□□ -1.88
CD46-216ENST00000490278 SLC35C1Q96A29 364 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 ATXN7L3BQ96GX2 97 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 IWS1Q96ST2 819 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 TRIM7Q9C029 511 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 SLC5A7Q9GZV3 580 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 GFRA4Q9GZZ7 299 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 VIPAS39Q9H9C1 493 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 MIS18AQ9NYP9 233 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 NLGN3Q9NZ94 848 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 NUDT4Q9NZJ9 180 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 TRPC4Q9UBN4 977 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 KLK11Q9UBX7 282 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 BAIAP2L1Q9UHR4 511 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 STX8Q9UNK0 236 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 PRSS21Q9Y6M0 314 aa3.3□□□□□ -1.88
CD46-216ENST00000490278 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.29□□□□□ -1.88
CD46-216ENST00000490278 A0A0J9YWU9 116 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 A0A1W2PRV1 198 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 SMIM30A4D0T7 59 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 GTPBP10A4D1E9 387 aaKnown RBP3.29□□□□□ -1.88
CD46-216ENST00000490278 SERINC4A6NH21 518 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 LMO7DNF2Z398 122 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 G3V2L1 256 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 SIGLEC5O15389 551 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 IDH3BO43837 385 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 NXPH4O95158 308 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 SERPINB2P05120 415 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 AOC1P19801 751 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 CTNNB1P35222 781 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 SERPINH1P50454 418 aaKnown RBP3.29□□□□□ -1.88
CD46-216ENST00000490278 ERVK-16P61578 105 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 ZNF177Q13360 481 aaPredicted RBP3.29□□□□□ -1.88
CD46-216ENST00000490278 NFATC2Q13469 925 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 GPR50Q13585 617 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 C2CD6Q53TS8 623 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 PLPP4Q5VZY2 271 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 ZFAND4Q86XD8 727 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 LAX1Q8IWV1 398 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 ELMOD1Q8N336 334 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 SLC43A2Q8N370 569 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 AQP11Q8NBQ7 271 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 PRSS33Q8NF86 280 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 OR9Q2Q8NGE9 314 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 OR13C5Q8NGS8 318 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 ATP8B4Q8TF62 1192 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 SMPDL3AQ92484 453 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 GGHQ92820 318 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 C18orf12Q96KH6 178 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 PRICKLE1Q96MT3 831 aaPredicted RBP3.29□□□□□ -1.88
CD46-216ENST00000490278 LGMNQ99538 433 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 UBAC1Q9BSL1 405 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 CCM2Q9BSQ5 444 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 LRRC2Q9BYS8 371 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 ACPTQ9BZG2 426 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 NAPBQ9H115 298 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 FNDC4Q9H6D8 234 aaPredicted RBP3.29□□□□□ -1.88
CD46-216ENST00000490278 AKIRIN1Q9H9L7 192 aaPredicted RBP3.29□□□□□ -1.88
CD46-216ENST00000490278 CWC25Q9NXE8 425 aaPredicted RBP3.29□□□□□ -1.88
CD46-216ENST00000490278 ZNF510Q9Y2H8 683 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 ZHX2Q9Y6X8 837 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 KIAA1217Q5T5P2 1943 aa3.29□□□□□ -1.88
CD46-216ENST00000490278 SOCS3O14543 225 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 TNFSF12O43508 249 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 GOSR1O95249 250 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 FGF19O95750 216 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 SBK2P0C263 348 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 CPA3P15088 417 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 ACKR3P25106 362 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 COPB2P35606 906 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 CASP3P42574 277 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 NDST2P52849 883 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms