RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 RNF183Q96D59 192 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 LINGO1Q96FE5 620 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 PCYT2Q99447 389 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ZBTB18Q99592 522 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 MEIS3Q99687 375 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 HAUS8Q9BT25 410 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 CAPS2Q9BXY5 557 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 TSPYL1Q9H0U9 437 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 CDT1Q9H211 546 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 TMEM245Q9H330 911 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 LRRC40Q9H9A6 602 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 PLAC1Q9HBJ0 212 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 CYSLTR2Q9NS75 346 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 GDAP2Q9NXN4 497 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 PTTG2Q9NZH5 202 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 STK39Q9UEW8 545 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 PSORS1C1Q9UIG5 152 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 KIAA1257Q9ULG3 409 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 GRIP1Q9Y3R0 1128 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 PTGDR2Q9Y5Y4 395 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 AP4B1Q9Y6B7 739 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 V9GYY5 206 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 NHSL1Q5SYE7 1610 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 CPSF1Q10570 1443 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ANKARQ7Z5J8 1434 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 PHLPP1O60346 1717 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 TRPM3Q9HCF6 1732 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 USP47Q96K76 1375 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 NPC1L1Q9UHC9 1359 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 MED1Q15648 1581 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 EIF4E1BA6NMX2 242 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 INAFM1C9JVW0 142 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 J3KR12 359 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 L7N2F9 121 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 CCL24O00175 119 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 SLC28A1O00337 649 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 FOXE1O00358 373 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 OGTO15294 1046 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 CTAGE5O15320 804 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 RNF113AO15541 343 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 CSO75390 466 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 VPS26AO75436 327 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 SAP30O75446 220 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ECI2O75521 394 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 TM7SF2O76062 418 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 MFN2O95140 757 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 PAPSS2O95340 614 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 EGFP01133 1207 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 TFPIP10646 304 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 CYP11B1P15538 503 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 UBA1P22314 1058 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 CALB2P22676 271 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 SP100P23497 879 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 PIK3R1P27986 724 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 DLSTP36957 453 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 NPBWR1P48145 328 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 SLC1A6P48664 564 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ASCL1P50553 236 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 HADHBP55084 474 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 PRMT2P55345 433 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 EIF3EP60228 445 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ACTR3P61158 418 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ARHGAP1Q07960 439 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ABRQ12979 859 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 TRAF1Q13077 416 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 PDIA5Q14554 519 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 MVPQ14764 893 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 SYT16Q17RD7 645 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ADPRMQ3LIE5 342 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 BCL7AQ4VC05 210 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 DCAF6Q58WW2 860 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 TMEM41BQ5BJD5 291 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 RABGAP1LQ5R372 815 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 TEX35Q5T0J7 233 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ATF7IP2Q5U623 682 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 LRRC38Q5VT99 294 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 AADACL4Q5VUY2 407 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 FAM46CQ5VWP2 391 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 CAPRIN2Q6IMN6 1127 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ZNF770Q6IQ21 691 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 PRR27Q6MZM9 219 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 TMEM71Q6P5X7 295 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 B3GLCTQ6Y288 498 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ARHGAP24Q8N264 748 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ARL14Q8N4G2 192 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 BCORP1Q8N888 145 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 BMPERQ8N8U9 685 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 PRR26Q8N8Z3 221 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 OR52K1Q8NGK4 314 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ARRDC2Q8TBH0 407 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 UBLCP1Q8WVY7 318 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 FAM84BQ96KN1 310 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 SFXN2Q96NB2 322 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 PCDHB18PQ96TA0 734 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 COQ7Q99807 217 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 WWTR1Q9GZV5 400 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 TMEM231Q9H6L2 316 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 MED20Q9H944 212 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ACTR5Q9H9F9 607 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms