RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 OR51M1Q9H341 326 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 BRD9Q9H8M2 597 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 POLE3Q9NRF9 147 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 KRT84Q9NSB2 600 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 SNTG1Q9NSN8 517 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 DNAJC11Q9NVH1 559 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 RCOR3Q9P2K3 495 aaPredicted RBP4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 SEC14L4Q9UDX3 406 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 GIMAP2Q9UG22 337 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 POLG2Q9UHN1 485 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF490Q9ULM2 529 aaPredicted RBP4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 NDRG2Q9UN36 371 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 MGAT4BQ9UQ53 548 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 SAMHD1Q9Y3Z3 626 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 ITGB4P16144 1822 aa4.59□□□□□ -1.68
SNRNP40-206ENST00000489853 ARID2Q68CP9 1835 aa4.59□□□□□ -1.68
SNRNP40-206ENST00000489853 DICER1Q9UPY3 1922 aaKnown RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 A0A0G2JPF8 293 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 RAB19A4D1S5 217 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 TRABD2BA6NFA1 517 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 HNRNPCL3B7ZW38 293 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SGK494L7N484 410 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 WWP2O00308 870 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SLC28A1O00337 649 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 KPNA3O00505 521 aaPredicted RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 E2F3O00716 465 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SGCEO43556 437 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 AKAP8O43823 692 aaKnown RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CREG1O75629 220 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 GLUD1P00367 558 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SERPINA1P01009 418 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 GHRHP01286 108 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 S100A8P05109 93 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 FCER2P06734 321 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 STSP08842 583 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 HBQ1P09105 142 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 HNRNPCL4P0DMR1 293 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 TSPAN8P19075 237 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CYP2B6P20813 491 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ITGB8P26012 769 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CALCRP30988 508 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 GGT2P36268 569 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PXNP49023 591 aaPredicted RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 GMPSP49915 693 aaPredicted RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PSMD4P55036 377 aaKnown RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PRMT2P55345 433 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PCBP4P57723 403 aaKnown RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 MTPNP58546 118 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 TGFB2P61812 414 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 EEF1A1P68104 462 aaKnown RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 EEF1A2Q05639 463 aaKnown RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SPP2Q13103 211 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 GPR17Q13304 367 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CAMK2DQ13557 499 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 FGL2Q14314 439 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ZNF460Q14592 562 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 DUOXA2Q1HG44 320 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 MICBQ29980 383 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SLC10A6Q3KNW5 377 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ZNF628Q5EBL2 1059 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CARD16Q5EG05 197 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 WIPI1Q5MNZ9 446 aaPredicted RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 DDI2Q5TDH0 399 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 MANEALQ5VSG8 457 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 EEF1A1P5Q5VTE0 462 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ZNF425Q6IV72 752 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 FAHD1Q6P587 224 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PKN3Q6P5Z2 889 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 RAB11FIP2Q7L804 512 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CHMP1BQ7LBR1 199 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 METTL23Q86XA0 190 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ZDHHC21Q8IVQ6 265 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ADGRF3Q8IZF5 1079 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 Q8N402 240 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 STPG2Q8N412 459 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 DNAJC5GQ8N7S2 189 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 GMCL1P1Q8NEA9 526 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 DENND6BQ8NEG7 585 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ZNF548Q8NEK5 533 aaPredicted RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 MCPH1Q8NEM0 835 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 WDR36Q8NI36 951 aaKnown RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 NANPQ8TBE9 248 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PHOSPHO2Q8TCD6 241 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 GPBAR1Q8TDU6 330 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CHTF18Q8WVB6 975 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SLC5A11Q8WWX8 675 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 TCEAL3Q969E4 200 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SLC25A46Q96AG3 418 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PGAP3Q96FM1 320 aaPredicted RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 MRPL48Q96GC5 212 aaKnown RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PLPPR2Q96GM1 343 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CELF6Q96J87 481 aaKnown RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PPM1MQ96MI6 270 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SLC38A2Q96QD8 506 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 OR2M2Q96R28 347 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 GFM1Q96RP9 751 aaKnown RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 TMEM43Q9BTV4 400 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 MSTO1Q9BUK6 570 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PTDSS2Q9BVG9 487 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 NUSAP1Q9BXS6 441 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms