RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 COPS7BQ9H9Q2 264 aaPredicted RBP20.59■□□□□ 0.89
SMC4-221ENST00000489573 SPAG4Q9NPE6 437 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 EXO1Q9UQ84 846 aaKnown RBP20.59■□□□□ 0.89
SMC4-221ENST00000489573 MDC1Q14676 2089 aaKnown RBP20.59■□□□□ 0.89
SMC4-221ENST00000489573 MN1Q10571 1320 aaPredicted RBP20.59■□□□□ 0.89
SMC4-221ENST00000489573 CPED1A4D0V7 1026 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 GABRR3A8MPY1 467 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 ZSCAN9O15535 394 aaPredicted RBP20.59■□□□□ 0.89
SMC4-221ENST00000489573 C9P02748 559 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 EIF2S1P05198 315 aaKnown RBP20.59■□□□□ 0.89
SMC4-221ENST00000489573 FURINP09958 794 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 PIM1P11309 404 aaPredicted RBP20.59■□□□□ 0.89
SMC4-221ENST00000489573 CSF2RBP32927 897 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 MLLT3P42568 568 aaPredicted RBP20.59■□□□□ 0.89
SMC4-221ENST00000489573 RAB8AP61006 207 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 KLC1Q07866 573 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 PDE7AQ13946 482 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 DEFB110Q30KQ9 67 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 PLA2G2CQ5R387 149 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 ANKRD26P1Q6NSI1 321 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 MCATQ8IVS2 390 aaKnown RBP20.59■□□□□ 0.89
SMC4-221ENST00000489573 DNAJC22Q8N4W6 341 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 AMER3Q8N944 861 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 FAM13CQ8NE31 585 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 OR8K5Q8NH50 307 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 UTP15Q8TED0 518 aaKnown RBP20.59■□□□□ 0.89
SMC4-221ENST00000489573 GTF2H4Q92759 462 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 NAT6Q93015 286 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 TM4SF18Q96CE8 201 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 SLC39A3Q9BRY0 314 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 NLNQ9BYT8 704 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 CHRNA10Q9GZZ6 450 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 KCNH6Q9H252 994 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 FAM120CQ9NX05 1096 aaKnown RBP20.59■□□□□ 0.89
SMC4-221ENST00000489573 KLHL3Q9UH77 587 aa20.59■□□□□ 0.89
SMC4-221ENST00000489573 IGHV5-51A0A0C4DH38 117 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 EME2A4GXA9 379 aaPredicted RBP20.58■□□□□ 0.88
SMC4-221ENST00000489573 RASSF9O75901 435 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 SCELO95171 688 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 KCNH1O95259 989 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 ZNF883P0CG24 379 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 LAMP1P11279 417 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 VSX2P58304 361 aaPredicted RBP20.58■□□□□ 0.88
SMC4-221ENST00000489573 MC1RQ01726 317 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 CFHR1Q03591 330 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 CAPRIN1Q14444 709 aaKnown RBP20.58■□□□□ 0.88
SMC4-221ENST00000489573 C6orf10Q5SRN2 563 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 PGM2L1Q6PCE3 622 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 ABHD13Q7L211 337 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 ACOT4Q8N9L9 421 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 ZCCHC10Q8TBK6 192 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 PPCDCQ96CD2 204 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 COQ8BQ96D53 544 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 ITCHQ96J02 903 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 DUSP26Q9BV47 211 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 ROGDIQ9GZN7 287 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 ATAD3AQ9NVI7 634 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 SOHLH2Q9NX45 425 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 MAN2B2Q9Y2E5 1009 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 BTBD3Q9Y2F9 522 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 CABIN1Q9Y6J0 2220 aa20.58■□□□□ 0.88
SMC4-221ENST00000489573 HCRTR1O43613 425 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 PDE5AO76074 875 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 ZBTB11O95625 1053 aaPredicted RBP20.57■□□□□ 0.88
SMC4-221ENST00000489573 SMIM10L1P0DMW3 83 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 MTTPP55157 894 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 BTN3A2P78410 334 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 ELF3P78545 371 aaPredicted RBP20.57■□□□□ 0.88
SMC4-221ENST00000489573 SLC9A5Q14940 896 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 HEPACAMQ14CZ8 416 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 SUZ12Q15022 739 aaKnown RBP20.57■□□□□ 0.88
SMC4-221ENST00000489573 PERM1Q5SV97 790 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 WDR74Q6RFH5 385 aaPredicted RBP20.57■□□□□ 0.88
SMC4-221ENST00000489573 DLEU7Q6UYE1 221 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 DGLUCYQ7Z3D6 616 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 FBXW8Q8N3Y1 598 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 EFCAB3Q8N7B9 438 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 DNAJB8Q8NHS0 232 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 SMIM10Q96HG1 83 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 BHLHE41Q9C0J9 482 aaPredicted RBP20.57■□□□□ 0.88
SMC4-221ENST00000489573 PDE7BQ9NP56 450 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 ADA2Q9NZK5 511 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 SH3BP4Q9P0V3 963 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 SLAMF8Q9P0V8 285 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 SLC7A8Q9UHI5 535 aa20.57■□□□□ 0.88
SMC4-221ENST00000489573 ARID1BQ8NFD5 2236 aaPredicted RBP20.57■□□□□ 0.88
SMC4-221ENST00000489573 C15orf38-AP3S2A0A0A6YYH1 394 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 MAP3K7O43318 606 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 SRPX2O60687 465 aaPredicted RBP20.56■□□□□ 0.88
SMC4-221ENST00000489573 CIB2O75838 187 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 FAM58BPP0C7Q3 252 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 DDCP20711 480 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 CERS1P27544 350 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 SLC7A2P52569 658 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 WNT3P56703 355 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 PLIN5Q00G26 463 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 SLAMF1Q13291 335 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 PROX2Q3B8N5 592 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 ZNF385BQ569K4 471 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 PIGGQ5H8A4 983 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms