RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 MTTPP55157 894 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 OC90Q02509 493 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-232ENST00000489053 Q0VFX4 171 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 STX4Q12846 297 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 DDX39BQ13838 428 aaKnown RBP8.59□□□□□ -1.03
HDAC6-232ENST00000489053 DOC2AQ14183 400 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 ACAP2Q15057 778 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 MEP1AQ16819 746 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 PFKFB4Q16877 469 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 ZXDCQ2QGD7 858 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-232ENST00000489053 TSNAXIP1Q2TAA8 658 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 AP5B1Q2VPB7 878 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 MED27Q6P2C8 311 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 TEX9Q8N6V9 391 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 Q8NA96 180 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 NOA1Q8NC60 698 aaKnown RBP8.59□□□□□ -1.03
HDAC6-232ENST00000489053 PLPP5Q8NEB5 264 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 OR2L5Q8NG80 312 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 RHEBL1Q8TAI7 183 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 UHMK1Q8TAS1 419 aaKnown RBP8.59□□□□□ -1.03
HDAC6-232ENST00000489053 M1APQ8TC57 530 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 TSLPQ969D9 159 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 ESAMQ96AP7 390 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 NXNL1Q96CM4 212 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 C19orf60Q96EN9 201 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 UBXN10Q96LJ8 280 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 KCNC2Q96PR1 638 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 CCDC77Q9BR77 488 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 MESP1Q9BRJ9 268 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 UTP23Q9BRU9 249 aaKnown RBP8.59□□□□□ -1.03
HDAC6-232ENST00000489053 TMEM79Q9BSE2 394 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 MCMBPQ9BTE3 642 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 NPLQ9BXD5 320 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-232ENST00000489053 CDC42EP4Q9H3Q1 356 aaKnown RBP8.59□□□□□ -1.03
HDAC6-232ENST00000489053 NT5DC2Q9H857 520 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 PNO1Q9NRX1 252 aaKnown RBP8.59□□□□□ -1.03
HDAC6-232ENST00000489053 OLAHQ9NV23 265 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 ADGRE2Q9UHX3 823 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 PTBP2Q9UKA9 531 aaKnown RBP8.59□□□□□ -1.03
HDAC6-232ENST00000489053 TMCO1Q9UM00 188 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 CENPEQ02224 2701 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 USP9YO00507 2555 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-232ENST00000489053 A0A1W2PQ72 361 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 LRIT2A6NDA9 550 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 OR2W5A6NFC9 320 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 A8MUA0 341 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 FCHO1O14526 889 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 DYRK3O43781 588 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 KLHL2O95198 593 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 WDPCPO95876 746 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 B3GALT4O96024 378 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 RBP1P09455 135 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 CD46P15529 392 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 MAOAP21397 527 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 SOX11P35716 441 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 SSR2P43308 183 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 TNFSF10P50591 281 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 ALDH18A1P54886 795 aaKnown RBP8.58□□□□□ -1.04
HDAC6-232ENST00000489053 PER3P56645 1201 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 IRF9Q00978 393 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 RHAGQ02094 409 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 RBPJQ06330 500 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 TBCCQ15814 346 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 INAQ16352 499 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 EIF2S3LQ2VIR3 472 aaKnown RBP8.58□□□□□ -1.04
HDAC6-232ENST00000489053 TMEM35AQ53FP2 167 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 ACER2Q5QJU3 275 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 IGFL2Q6UWQ7 119 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 QSOX2Q6ZRP7 698 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 ISCA2Q86U28 154 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 ZNF595Q8IYB9 648 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 CA13Q8N1Q1 262 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 FAM47BQ8NA70 645 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 FAM98AQ8NCA5 519 aaKnown RBP8.58□□□□□ -1.04
HDAC6-232ENST00000489053 CREB3L4Q8TEY5 395 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 TMEM125Q96AQ2 219 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 CMTM7Q96FZ5 175 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 IMMP1LQ96LU5 166 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 SERINC2Q96SA4 455 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 PAFAH2Q99487 392 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 DEFB126Q9BYW3 111 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 RNF32Q9H0A6 362 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 KLHL31Q9H511 634 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 MMP25Q9NPA2 562 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 PRTFDC1Q9NRG1 225 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 IGSF5Q9NSI5 407 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 DMGDHQ9UI17 866 aaKnown RBP8.58□□□□□ -1.04
HDAC6-232ENST00000489053 NFU1Q9UMS0 254 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 MMACHCQ9Y4U1 282 aa8.58□□□□□ -1.04
HDAC6-232ENST00000489053 MED13Q9UHV7 2174 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 PRAMEF2O60811 474 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 SH3BGRLO75368 114 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 MYO1DO94832 1006 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 RASAL1O95294 804 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 WISP3O95389 354 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-232ENST00000489053 RHOXF2BP0C7M4 288 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 COX7A2P14406 83 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 TNNI3P19429 210 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 CERS1P27544 350 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 TLX1P31314 330 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms