RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 ELP5Q8TE02 316 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 FBF1Q8TES7 1133 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 EXT2Q93063 718 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 KIAA1191Q96A73 305 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 MS4A6EQ96DS6 147 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 UBXN10Q96LJ8 280 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 CAPS2Q9BXY5 557 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 HES7Q9BYE0 225 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 RAB17Q9H0T7 212 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 NT5DC2Q9H857 520 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 CNOT10Q9H9A5 744 aaKnown RBP11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 PRDM9Q9NQV7 894 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 GPRC5BQ9NZH0 403 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 SEC14L3Q9UDX4 400 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 PTBP2Q9UKA9 531 aaKnown RBP11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 ZNF490Q9ULM2 529 aaPredicted RBP11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 RNF112Q9ULX5 631 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 HIVEP3Q5T1R4 2406 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 IGKV3D-11A0A0A0MRZ8 115 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 A0A1B0GUH1 482 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 TCRBV16S1A1N1A0A5B0 115 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 ANKDD1BA6NHY2 528 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 CCNT2O60583 730 aaKnown RBP11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 ZG16O60844 167 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 S100BP04271 92 aaPredicted RBP11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 PLA2G16P53816 162 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 PER3P56645 1201 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 DLG1Q12959 904 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 DOC2AQ14183 400 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 SLMAPQ14BN4 828 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 EFTUD2Q15029 972 aaKnown RBP eCLIP11.18□□□□□ -0.622e-10■■■■□ 21.3
CCHCR1-215ENST00000488920 ZKSCAN8Q15776 578 aaPredicted RBP11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 PDK4Q16654 411 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 XKR6Q5GH73 641 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 CDKL4Q5MAI5 379 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 ZNF468Q5VIY5 522 aaPredicted RBP11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 ADNP2Q6IQ32 1131 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 RAPH1Q70E73 1250 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 VN1R5Q7Z5H4 357 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 CMC1Q7Z7K0 106 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 RPS19BP1Q86WX3 136 aaKnown RBP11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 ARMC2Q8NEN0 867 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 NFAM1Q8NET5 270 aaPredicted RBP11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 GAL3ST3Q96A11 431 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 ALG9Q9H6U8 611 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 ASB1Q9Y576 335 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 POLEQ07864 2286 aa11.18□□□□□ -0.62
CCHCR1-215ENST00000488920 ESYT3A0FGR9 886 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 SAGE2PA6NJ88 616 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 B3GALT2O43825 422 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 CLEC3AO75596 197 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 TBX6O95947 436 aaPredicted RBP11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 SP1P08047 785 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 SLC35E2BP0CK96 405 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 CD46P15529 392 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 EPORP19235 508 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 CD22P20273 847 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 TPP2P29144 1249 aaPredicted RBP11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 STX2P32856 288 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 DCTP40126 519 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 HNRNPFP52597 415 aaKnown RBP11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 ISCA2Q86U28 154 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 FAM47BQ8NA70 645 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 PDPRQ8NCN5 879 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 TMEM52Q8NDY8 209 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 STAG3L4Q8TBR4 150 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 RELTQ969Z4 430 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 MRRFQ96E11 262 aaKnown RBP11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 PTCD3Q96EY7 689 aaKnown RBP11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 QRFPRQ96P65 431 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 F2RL3Q96RI0 385 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 NPLQ9BXD5 320 aaPredicted RBP11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 CD244Q9BZW8 370 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 PITHD1Q9GZP4 211 aaPredicted RBP11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 REXO4Q9GZR2 422 aaKnown RBP11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 EHD1Q9H4M9 534 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 PRM3Q9NNZ6 103 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 PNO1Q9NRX1 252 aaKnown RBP11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 LRFN1Q9P244 771 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 COPG2Q9UBF2 871 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 NBPF19A0A087WUL8 3843 aa11.17□□□□□ -0.62
CCHCR1-215ENST00000488920 DOPEY1Q5JWR5 2465 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 TRGV8A0A0C4DH27 118 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 MYOCOSA0A1B0GUC4 107 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 SUPT3HB4E1H0 165 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 TGFBR3LH3BV60 316 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 UBXN8O00124 270 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 CLDN4O14493 209 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 SUPT3HO75486 399 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 NEURL1O76050 574 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 MYO1DO94832 1006 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 TFEBP19484 476 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 GSTM2P28161 218 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 CRABP2P29373 138 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 EEF1DP29692 281 aaKnown RBP11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 PPP2R1BP30154 601 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 MLF1P58340 268 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 IRF8Q02556 426 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 GUCY2DQ02846 1103 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 SLC13A2Q13183 592 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms