RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 HAUS8Q9BT25 410 aa10.59□□□□□ -0.71
SNU13-208ENST00000488571 DEFB126Q9BYW3 111 aa10.59□□□□□ -0.71
SNU13-208ENST00000488571 AICDAQ9GZX7 198 aa10.59□□□□□ -0.71
SNU13-208ENST00000488571 TP63Q9H3D4 680 aaPredicted RBP10.59□□□□□ -0.71
SNU13-208ENST00000488571 NECTIN3Q9NQS3 549 aa10.59□□□□□ -0.71
SNU13-208ENST00000488571 DEPPQ9NTK1 212 aa10.59□□□□□ -0.71
SNU13-208ENST00000488571 C20orf96Q9NUD7 363 aaPredicted RBP10.59□□□□□ -0.71
SNU13-208ENST00000488571 TRMT6Q9UJA5 497 aaKnown RBP10.59□□□□□ -0.71
SNU13-208ENST00000488571 ZNF223Q9UK11 482 aaPredicted RBP10.59□□□□□ -0.71
SNU13-208ENST00000488571 ZNF407Q9C0G0 2248 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 TRBV11-1A0A0K0K1C0 115 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 A8MUA0 341 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 FOXO6A8MYZ6 492 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 KLRC4-KLRK1H3BQV0 150 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 FCHO1O14526 889 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 SLC16A5O15375 505 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 CDC40O60508 579 aaKnown RBP eCLIP10.58□□□□□ -0.72
SNU13-208ENST00000488571 ITGA10O75578 1167 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 PDE9AO76083 593 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 SERPIND1P05546 499 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 HOXD4P09016 255 aaPredicted RBP10.58□□□□□ -0.72
SNU13-208ENST00000488571 GABRB3P28472 473 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 SCTRP47872 440 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 RGS4P49798 205 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 CDKN2DP55273 166 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 HSP90AA5PQ58FG0 334 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 RBM20Q5T481 1227 aaKnown RBP10.58□□□□□ -0.72
SNU13-208ENST00000488571 DUPD1Q68J44 220 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 TMEM211Q6ICI0 200 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 NIPAL1Q6NVV3 410 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 TTC27Q6P3X3 843 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 PAQR3Q6TCH7 311 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 KIAA0408Q6ZU52 694 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 ABHD13Q7L211 337 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 CCDC71Q8IV32 467 aaPredicted RBP10.58□□□□□ -0.72
SNU13-208ENST00000488571 CYP4Z2PQ8N1L4 340 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 B3GNT7Q8NFL0 401 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 OR56A3Q8NH54 315 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 CALML6Q8TD86 181 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 MAIP1Q8WWC4 291 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 RND1Q92730 232 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 SEC16BQ96JE7 1060 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 SIGLEC10Q96LC7 697 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 XAB2Q9HCS7 855 aaKnown RBP10.58□□□□□ -0.72
SNU13-208ENST00000488571 ZFATQ9P243 1243 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 ZFP69BQ9UJL9 534 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 CLDN16Q9Y5I7 305 aa10.58□□□□□ -0.72
SNU13-208ENST00000488571 PINLYPA6NC86 204 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 TGFBR3LH3BV60 316 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 WIPF1O43516 503 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 PRKNO60260 465 aaPredicted RBP10.57□□□□□ -0.72
SNU13-208ENST00000488571 KRT14P02533 472 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 SMIM10L1P0DMW3 83 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 RNH1P13489 461 aaKnown RBP10.57□□□□□ -0.72
SNU13-208ENST00000488571 DNAJA1P31689 397 aaKnown RBP10.57□□□□□ -0.72
SNU13-208ENST00000488571 AHRP35869 848 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 GPR143P51810 404 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 PGGT1BP53609 377 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 NUP107P57740 925 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 RAB8AP61006 207 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 SKP1P63208 163 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 RGS1Q08116 209 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 PMPCAQ10713 525 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 C4orf48Q5BLP8 95 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 UGT3A1Q6NUS8 523 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 ARHGAP11AQ6P4F7 1023 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 PALM2Q8IXS6 379 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 CA13Q8N1Q1 262 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 MYO1HQ8N1T3 1032 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 TMEM156Q8N614 296 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 C2CD4AQ8NCU7 369 aaPredicted RBP10.57□□□□□ -0.72
SNU13-208ENST00000488571 NEIL2Q969S2 332 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 LINGO1Q96FE5 620 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 SMIM10Q96HG1 83 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 FAM167BQ9BTA0 163 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 DEFB127Q9H1M4 99 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 KLHL31Q9H511 634 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 CLK4Q9HAZ1 481 aaKnown RBP10.57□□□□□ -0.72
SNU13-208ENST00000488571 KCNJ16Q9NPI9 418 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 IARS2Q9NSE4 1012 aaKnown RBP10.57□□□□□ -0.72
SNU13-208ENST00000488571 KCNN3Q9UGI6 736 aa10.57□□□□□ -0.72
SNU13-208ENST00000488571 PPIEQ9UNP9 301 aaKnown RBP10.57□□□□□ -0.72
SNU13-208ENST00000488571 DNAJC13O75165 2243 aa10.56□□□□□ -0.72
SNU13-208ENST00000488571 TMEM200CA6NKL6 621 aa10.56□□□□□ -0.72
SNU13-208ENST00000488571 MYO1DO94832 1006 aa10.56□□□□□ -0.72
SNU13-208ENST00000488571 HOXB4P17483 251 aaPredicted RBP10.56□□□□□ -0.72
SNU13-208ENST00000488571 CXCR5P32302 372 aa10.56□□□□□ -0.72
SNU13-208ENST00000488571 HNF4AP41235 474 aa10.56□□□□□ -0.72
SNU13-208ENST00000488571 CLCN2P51788 898 aa10.56□□□□□ -0.72
SNU13-208ENST00000488571 IST1P53990 364 aa10.56□□□□□ -0.72
SNU13-208ENST00000488571 REEP5Q00765 189 aa10.56□□□□□ -0.72
SNU13-208ENST00000488571 TERF2Q15554 542 aa10.56□□□□□ -0.72
SNU13-208ENST00000488571 C16orf47Q6ZP98 133 aaPredicted RBP10.56□□□□□ -0.72
SNU13-208ENST00000488571 TMEM200AQ86VY9 491 aa10.56□□□□□ -0.72
SNU13-208ENST00000488571 SCUBE1Q8IWY4 988 aa10.56□□□□□ -0.72
SNU13-208ENST00000488571 SPC24Q8NBT2 197 aa10.56□□□□□ -0.72
SNU13-208ENST00000488571 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.56□□□□□ -0.72
SNU13-208ENST00000488571 PSD4Q8NDX1 1056 aa10.56□□□□□ -0.72
SNU13-208ENST00000488571 SLC5A11Q8WWX8 675 aa10.56□□□□□ -0.72
SNU13-208ENST00000488571 FBXL8Q96CD0 374 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms