RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 OSGIN2Q9Y236 505 aa21.67■■□□□ 1.06
CUL4A-209ENST00000488558 S100BP04271 92 aaPredicted RBP21.66■■□□□ 1.06
CUL4A-209ENST00000488558 SLC35E2BP0CK96 405 aa21.66■■□□□ 1.06
CUL4A-209ENST00000488558 CRABP2P29373 138 aa21.66■■□□□ 1.06
CUL4A-209ENST00000488558 BTN3A2P78410 334 aa21.66■■□□□ 1.06
CUL4A-209ENST00000488558 BTG2P78543 158 aa21.66■■□□□ 1.06
CUL4A-209ENST00000488558 E2F2Q14209 437 aa21.66■■□□□ 1.06
CUL4A-209ENST00000488558 SLMAPQ14BN4 828 aa21.66■■□□□ 1.06
CUL4A-209ENST00000488558 TERF2Q15554 542 aa21.66■■□□□ 1.06
CUL4A-209ENST00000488558 TRADDQ15628 312 aa21.66■■□□□ 1.06
CUL4A-209ENST00000488558 ZNF766Q5HY98 468 aa21.66■■□□□ 1.06
CUL4A-209ENST00000488558 FCRLBQ6BAA4 426 aa21.66■■□□□ 1.06
CUL4A-209ENST00000488558 C8orf74Q6P047 294 aa21.66■■□□□ 1.06
CUL4A-209ENST00000488558 LRRC70Q7Z2Q7 622 aa21.66■■□□□ 1.06
CUL4A-209ENST00000488558 CCDC91Q7Z6B0 441 aa21.66■■□□□ 1.06
CUL4A-209ENST00000488558 OR2L5Q8NG80 312 aa21.66■■□□□ 1.06
CUL4A-209ENST00000488558 STAG3L4Q8TBR4 150 aa21.66■■□□□ 1.06
CUL4A-209ENST00000488558 UTP23Q9BRU9 249 aaKnown RBP21.66■■□□□ 1.06
CUL4A-209ENST00000488558 NUDT4Q9NZJ9 180 aa21.66■■□□□ 1.06
CUL4A-209ENST00000488558 ZGRF1Q86YA3 2104 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 A1L4Q6 167 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 SYNDIG1LA6NDD5 238 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 ANKDD1BA6NHY2 528 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 ERI3O43414 337 aaKnown RBP21.65■■□□□ 1.06
CUL4A-209ENST00000488558 MAOAP21397 527 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 LAPTM5Q13571 262 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 TBCCQ15814 346 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 PAGE2BQ5JRK9 111 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 RAPH1Q70E73 1250 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 VN1R5Q7Z5H4 357 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 TBC1D1Q86TI0 1168 aaPredicted RBP21.65■■□□□ 1.06
CUL4A-209ENST00000488558 SCUBE1Q8IWY4 988 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 SNX31Q8N9S9 440 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 UBTD2Q8WUN7 234 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 CCT6BQ92526 530 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 QRFPRQ96P65 431 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 CD244Q9BZW8 370 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 RHBGQ9H310 441 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 NMRAL1Q9HBL8 299 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 SVILO95425 2214 aa21.65■■□□□ 1.06
CUL4A-209ENST00000488558 A0A1B0GUH1 482 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 CCDC189A1A4V9 331 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 LRRTM2O43300 516 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 PRAMEF4O60810 478 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 KERAO60938 352 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 FAM155BO75949 473 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 TBX6O95947 436 aaPredicted RBP21.64■■□□□ 1.05
CUL4A-209ENST00000488558 CASP2P42575 452 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 HSD17B7P56937 341 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 DOC2AQ14183 400 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 OR1C1Q15619 314 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 XKR6Q5GH73 641 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 PRAMEF9Q5VWM5 478 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 TRIM40Q6P9F5 258 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 CMC1Q7Z7K0 106 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 ISCA2Q86U28 154 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 ARMC10Q8N2F6 343 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 HORMAD2Q8N7B1 307 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 NFAM1Q8NET5 270 aaPredicted RBP21.64■■□□□ 1.05
CUL4A-209ENST00000488558 SCMH1Q96GD3 660 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 ATOH8Q96SQ7 321 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 REXO4Q9GZR2 422 aaKnown RBP21.64■■□□□ 1.05
CUL4A-209ENST00000488558 ALG9Q9H6U8 611 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 NECTIN3Q9NQS3 549 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 ZDHHC18Q9NUE0 388 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 ZNF490Q9ULM2 529 aaPredicted RBP21.64■■□□□ 1.05
CUL4A-209ENST00000488558 NBPF19A0A087WUL8 3843 aa21.64■■□□□ 1.05
CUL4A-209ENST00000488558 GABRR3A8MPY1 467 aa21.63■■□□□ 1.05
CUL4A-209ENST00000488558 FAM227AF5H4B4 570 aa21.63■■□□□ 1.05
CUL4A-209ENST00000488558 B3GALT2O43825 422 aa21.63■■□□□ 1.05
CUL4A-209ENST00000488558 CLDN1O95832 211 aa21.63■■□□□ 1.05
CUL4A-209ENST00000488558 LTA4HP09960 611 aaKnown RBP21.63■■□□□ 1.05
CUL4A-209ENST00000488558 EPORP19235 508 aa21.63■■□□□ 1.05
CUL4A-209ENST00000488558 TFEBP19484 476 aa21.63■■□□□ 1.05
CUL4A-209ENST00000488558 CD96P40200 585 aa21.63■■□□□ 1.05
CUL4A-209ENST00000488558 RAB38P57729 211 aa21.63■■□□□ 1.05
CUL4A-209ENST00000488558 PCDH1Q08174 1060 aa21.63■■□□□ 1.05
CUL4A-209ENST00000488558 DLG1Q12959 904 aa21.63■■□□□ 1.05
CUL4A-209ENST00000488558 RUNX2Q13950 521 aa21.63■■□□□ 1.05
CUL4A-209ENST00000488558 FBXO48Q5FWF7 155 aa21.63■■□□□ 1.05
CUL4A-209ENST00000488558 RPS19BP1Q86WX3 136 aaKnown RBP21.63■■□□□ 1.05
CUL4A-209ENST00000488558 CYP4X1Q8N118 509 aa21.63■■□□□ 1.05
CUL4A-209ENST00000488558 TMEM178AQ8NBL3 297 aa21.63■■□□□ 1.05
CUL4A-209ENST00000488558 ESAMQ96AP7 390 aa21.63■■□□□ 1.05
CUL4A-209ENST00000488558 SIGLEC12Q96PQ1 595 aa21.63■■□□□ 1.05
CUL4A-209ENST00000488558 SERINC2Q96SA4 455 aa21.63■■□□□ 1.05
CUL4A-209ENST00000488558 MRPS33Q9Y291 106 aaKnown RBP21.63■■□□□ 1.05
CUL4A-209ENST00000488558 MAN1A2O60476 641 aa21.62■■□□□ 1.05
CUL4A-209ENST00000488558 CD46P15529 392 aa21.62■■□□□ 1.05
CUL4A-209ENST00000488558 CD22P20273 847 aa21.62■■□□□ 1.05
CUL4A-209ENST00000488558 MST1P26927 711 aa21.62■■□□□ 1.05
CUL4A-209ENST00000488558 KCNC1P48547 511 aa21.62■■□□□ 1.05
CUL4A-209ENST00000488558 IRF8Q02556 426 aa21.62■■□□□ 1.05
CUL4A-209ENST00000488558 TGM3Q08188 693 aa21.62■■□□□ 1.05
CUL4A-209ENST00000488558 RCN2Q14257 317 aa21.62■■□□□ 1.05
CUL4A-209ENST00000488558 EFTUD2Q15029 972 aaKnown RBP eCLIP21.62■■□□□ 1.057e-7■■■■□ 20.3
CUL4A-209ENST00000488558 HIST2H2ACQ16777 129 aaPredicted RBP21.62■■□□□ 1.05
CUL4A-209ENST00000488558 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.62■■□□□ 1.054e-6■□□□□ 9.4
CUL4A-209ENST00000488558 HIST2H2AA3Q6FI13 130 aa21.62■■□□□ 1.05
CUL4A-209ENST00000488558 ABHD17CQ6PCB6 329 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms