RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 CTXN3Q4LDR2 81 aa13.62□□□□□ -0.23
COL16A1-214ENST00000488128 ZNF367Q7RTV3 350 aa13.62□□□□□ -0.23
COL16A1-214ENST00000488128 TIGD4Q8IY51 512 aa13.62□□□□□ -0.23
COL16A1-214ENST00000488128 PIH1D2Q8WWB5 315 aa13.62□□□□□ -0.23
COL16A1-214ENST00000488128 PKP4Q99569 1192 aa13.62□□□□□ -0.23
COL16A1-214ENST00000488128 RAD9AQ99638 391 aa13.62□□□□□ -0.23
COL16A1-214ENST00000488128 IL26Q9NPH9 171 aa13.62□□□□□ -0.23
COL16A1-214ENST00000488128 COMMD3Q9UBI1 195 aa13.62□□□□□ -0.23
COL16A1-214ENST00000488128 CMAHPQ9Y471 501 aa13.62□□□□□ -0.23
COL16A1-214ENST00000488128 SCN10AQ9Y5Y9 1956 aa13.62□□□□□ -0.23
COL16A1-214ENST00000488128 PRKAR2AP13861 404 aaKnown RBP13.61□□□□□ -0.23
COL16A1-214ENST00000488128 MAPKAPK2P49137 400 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 GATMP50440 423 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 BOP1Q14137 746 aaKnown RBP13.61□□□□□ -0.23
COL16A1-214ENST00000488128 MBTPS1Q14703 1052 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 MICAQ29983 383 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 LRRC73Q5JTD7 316 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 SAXO2Q658L1 398 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 PLAG1Q6DJT9 500 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 SYNPOQ8N3V7 929 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 FOXJ1Q92949 421 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 TESCQ96BS2 214 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 MIXL1Q9H2W2 232 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 PLXNA4Q9HCM2 1894 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 CKAP5Q14008 2032 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 GABRR3A8MPY1 467 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 CSO75390 466 aaKnown RBP13.61□□□□□ -0.23
COL16A1-214ENST00000488128 MTX2O75431 263 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 OR2B3O76000 313 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 GJB5O95377 273 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 F11P03951 625 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 HBQ1P09105 142 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 CHMP24386 653 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 CDC42P60953 191 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 CHIT1Q13231 466 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 QPRTQ15274 297 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 RGNQ15493 299 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 SPHARQ15513 63 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 CHRNA6Q15825 494 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 DUSP7Q16829 419 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.61□□□□□ -0.23
COL16A1-214ENST00000488128 MPPE1Q53F39 396 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 RFLNAQ6ZTI6 216 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 FAM20CQ8IXL6 584 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 VWA5B2Q8N398 1253 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 LMNTD1Q8N9Z9 388 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 NFKBIDQ8NI38 313 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 LINC01599Q8WXQ3 324 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 SLC32A1Q9H598 525 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 MCUBQ9NWR8 336 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 NDRG2Q9UN36 371 aaKnown RBP13.61□□□□□ -0.23
COL16A1-214ENST00000488128 MAP4K5Q9Y4K4 846 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 TRPM7Q96QT4 1865 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 OAZ2O95190 189 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 CRYBB2P43320 205 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 SELENOWP63302 87 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 ARF5P84085 180 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 NFATC2Q13469 925 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 LARS2Q15031 903 aaKnown RBP13.61□□□□□ -0.23
COL16A1-214ENST00000488128 SPDYE7PQ495Y7 208 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 FRG2Q64ET8 278 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 PLET1Q6UQ28 207 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 UBE2R2Q712K3 238 aaPredicted RBP13.61□□□□□ -0.23
COL16A1-214ENST00000488128 RNF130Q86XS8 419 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 VRK3Q8IV63 474 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 FAM109AQ8N4B1 249 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 ZFP41Q8N8Y5 198 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 DENND6BQ8NEG7 585 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 CRELD1Q96HD1 420 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 RIPOR3Q96MK2 946 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 FAM193BQ96PV7 902 aaPredicted RBP13.61□□□□□ -0.23
COL16A1-214ENST00000488128 FRG2BQ96QU4 278 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 DUSP26Q9BV47 211 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 GPR62Q9BZJ7 368 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 MKRN2Q9H000 416 aaKnown RBP13.61□□□□□ -0.23
COL16A1-214ENST00000488128 SLC23A1Q9UHI7 598 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 TRAPPC4Q9Y296 219 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 POFUT2Q9Y2G5 429 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 PCDHB11Q9Y5F2 797 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 ALG5Q9Y673 324 aa13.61□□□□□ -0.23
COL16A1-214ENST00000488128 H3BN98 237 aa13.6□□□□□ -0.23
COL16A1-214ENST00000488128 GAPDHSO14556 408 aaPredicted RBP13.6□□□□□ -0.23
COL16A1-214ENST00000488128 ADAMDEC1O15204 470 aa13.6□□□□□ -0.23
COL16A1-214ENST00000488128 PRPS1L1P21108 318 aa13.6□□□□□ -0.23
COL16A1-214ENST00000488128 SDC2P34741 201 aa13.6□□□□□ -0.23
COL16A1-214ENST00000488128 LRRC74AQ0VAA2 488 aa13.6□□□□□ -0.23
COL16A1-214ENST00000488128 TSTA3Q13630 321 aaPredicted RBP13.6□□□□□ -0.23
COL16A1-214ENST00000488128 TRIM71Q2Q1W2 868 aaKnown RBP13.6□□□□□ -0.23
COL16A1-214ENST00000488128 GPRC6AQ5T6X5 926 aa13.6□□□□□ -0.23
COL16A1-214ENST00000488128 CCDC149Q6ZUS6 474 aa13.6□□□□□ -0.23
COL16A1-214ENST00000488128 TMC8Q8IU68 726 aa13.6□□□□□ -0.23
COL16A1-214ENST00000488128 RBFAQ8N0V3 343 aa13.6□□□□□ -0.23
COL16A1-214ENST00000488128 SETD6Q8TBK2 473 aa13.6□□□□□ -0.23
COL16A1-214ENST00000488128 RASSF5Q8WWW0 418 aa13.6□□□□□ -0.23
COL16A1-214ENST00000488128 MAGEH1Q9H213 219 aa13.6□□□□□ -0.23
COL16A1-214ENST00000488128 CLN6Q9NWW5 311 aa13.6□□□□□ -0.23
COL16A1-214ENST00000488128 RAB23Q9ULC3 237 aa13.6□□□□□ -0.23
COL16A1-214ENST00000488128 PCDHB1Q9Y5F3 818 aa13.6□□□□□ -0.23
COL16A1-214ENST00000488128 SNX11Q9Y5W9 270 aa13.6□□□□□ -0.23
COL16A1-214ENST00000488128 NLRC5Q86WI3 1866 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms