RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 SLC22A15Q8IZD6 547 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 METTL4Q8N3J2 472 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 DPP10Q8N608 796 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 PTGR2Q8N8N7 351 aaPredicted RBP13.16□□□□□ -0.3
COPS7B-221ENST00000488111 SIMC1Q8NDZ2 872 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 KIAA1191Q96A73 305 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 BMFQ96LC9 184 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 UGT2B28Q9BY64 529 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 LATS2Q9NRM7 1088 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 PHPT1Q9NRX4 125 aaPredicted RBP13.16□□□□□ -0.3
COPS7B-221ENST00000488111 GULP1Q9UBP9 304 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 VEGFDO43915 354 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 SLC22A3O75751 556 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 POP7O75817 140 aaKnown RBP13.16□□□□□ -0.3
COPS7B-221ENST00000488111 ENDOUP21128 410 aaKnown RBP13.16□□□□□ -0.3
COPS7B-221ENST00000488111 HNRNPA2B1P22626 353 aaKnown RBP13.16□□□□□ -0.3
COPS7B-221ENST00000488111 RGS4P49798 205 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 GNG2P59768 71 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 TUBA1BP68363 451 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 MVKQ03426 396 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 NKG7Q16617 165 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 TTLL9Q3SXZ7 439 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 KIAA0895LQ68EN5 471 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 TUBA1AQ71U36 451 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 B3GNT8Q7Z7M8 397 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 CFAP206Q8IYR0 622 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 FAM86B1Q8N7N1 296 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 RASSF5Q8WWW0 418 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 EDAQ92838 391 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 RPL3LQ92901 407 aaKnown RBP13.16□□□□□ -0.3
COPS7B-221ENST00000488111 ZHX1-C8orf76Q96EF9 292 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 CCDC115Q96NT0 180 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 TFB2MQ9H5Q4 396 aaKnown RBP13.16□□□□□ -0.3
COPS7B-221ENST00000488111 RNF112Q9ULX5 631 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 TPRKBQ9Y3C4 175 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 A3GALT2U3KPV4 340 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 PIKFYVEQ9Y2I7 2098 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 FAM234BA2RU67 622 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 FPGTO14772 594 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 BCKDKO14874 412 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 HAT1O14929 419 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 LATO43561 262 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 SNX2O60749 519 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 CST1P01037 141 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 MT-ND2P03891 347 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 MYCLP1P12525 358 aaPredicted RBP13.15□□□□□ -0.3
COPS7B-221ENST00000488111 CASP2P42575 452 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 CXCR4P61073 352 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 ZNF544Q6NX49 715 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 DLEU7Q6UYE1 221 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 CELF2-AS1Q8N7Q2 184 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 STAG3L4Q8TBR4 150 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 ATOH8Q96SQ7 321 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 NXF2Q9GZY0 626 aaKnown RBP13.15□□□□□ -0.3
COPS7B-221ENST00000488111 DCSTAMPQ9H295 470 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 GORASP2Q9H8Y8 452 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 TM9SF3Q9HD45 589 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 TMEM45AQ9NWC5 275 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 ZIM2Q9NZV7 527 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 SLC23A2Q9UGH3 650 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 TMEFF2Q9UIK5 374 aaPredicted RBP13.15□□□□□ -0.3
COPS7B-221ENST00000488111 SLCO1B1Q9Y6L6 691 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 LRRC14BA6NHZ5 514 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 EFCAB9A8MZ26 197 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 K7ESF4 209 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 QSOX1O00391 747 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 HS6ST1O60243 411 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 MRPS14O60783 128 aaKnown RBP13.15□□□□□ -0.3
COPS7B-221ENST00000488111 SIX3O95343 332 aaPredicted RBP13.15□□□□□ -0.3
COPS7B-221ENST00000488111 ABCB1P08183 1280 aaPredicted RBP13.15□□□□□ -0.3
COPS7B-221ENST00000488111 PDHA2P29803 388 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 TGFBR1P36897 503 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 ZNF45Q02386 682 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 RAPSNQ13702 412 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 RFX4Q33E94 735 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 BCL7AQ4VC05 210 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 SYTL3Q4VX76 610 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 TPRG1LQ5T0D9 272 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 SPESP1Q6UW49 350 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 RFPL4BQ6ZWI9 263 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 CAMKK1Q8N5S9 505 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 ANKK1Q8NFD2 765 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 OR5K1Q8NHB7 308 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 ASZ1Q8WWH4 475 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 ASB12Q8WXK4 309 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 PDLIM5Q96HC4 596 aaKnown RBP13.15□□□□□ -0.3
COPS7B-221ENST00000488111 NSUN5Q96P11 429 aaKnown RBP13.15□□□□□ -0.3
COPS7B-221ENST00000488111 EPHX3Q9H6B9 360 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 EPS8L2Q9H6S3 715 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 ACOT13Q9NPJ3 140 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 SPATA6Q9NWH7 488 aaPredicted RBP13.15□□□□□ -0.3
COPS7B-221ENST00000488111 PNMA8BQ9ULN7 279 aaPredicted RBP13.15□□□□□ -0.3
COPS7B-221ENST00000488111 MAU2Q9Y6X3 613 aa13.15□□□□□ -0.3
COPS7B-221ENST00000488111 LOC105371267A0A1B0GV96 52 aa13.14□□□□□ -0.31
COPS7B-221ENST00000488111 SUPT3HB4E1H0 165 aa13.14□□□□□ -0.31
COPS7B-221ENST00000488111 CACNB4O00305 520 aaPredicted RBP13.14□□□□□ -0.31
COPS7B-221ENST00000488111 MTHFD2P13995 350 aa13.14□□□□□ -0.31
COPS7B-221ENST00000488111 GTF2E2P29084 291 aaKnown RBP13.14□□□□□ -0.31
COPS7B-221ENST00000488111 HK3P52790 923 aa13.14□□□□□ -0.31
COPS7B-221ENST00000488111 IL5RAQ01344 420 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms