RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, humanhuman

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-208ENST00000487876 MAGEB17A8MXT2 336 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 TRIM49D1C9J1S8 452 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 KLK8O60259 260 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 SH3BGRLO75368 114 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 WFS1O76024 890 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 SIX3O95343 332 aaPredicted RBP12.13□□□□□ -0.47
RPSA-208ENST00000487876 RNH1P13489 461 aaKnown RBP12.13□□□□□ -0.47
RPSA-208ENST00000487876 MAOAP21397 527 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 IL10P22301 178 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 CERS1P27544 350 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 GSTM2P28161 218 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 CASP2P42575 452 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 MSH2P43246 934 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 SERPINB9P50453 376 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 E2F2Q14209 437 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 NAA30Q147X3 362 aaPredicted RBP12.13□□□□□ -0.47
RPSA-208ENST00000487876 TBCCQ15814 346 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 BTBD16Q32M84 506 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 ADPRMQ3LIE5 342 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 CRB2Q5IJ48 1285 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 NIPAL1Q6NVV3 410 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 KLC3Q6P597 504 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 PAPD4Q6PIY7 484 aaKnown RBP12.13□□□□□ -0.47
RPSA-208ENST00000487876 RIPOR1Q6ZS17 1223 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 IQCKQ8N0W5 287 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 CISD2Q8N5K1 135 aaKnown RBP12.13□□□□□ -0.47
RPSA-208ENST00000487876 TMEM52Q8NDY8 209 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 PLPP5Q8NEB5 264 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 CATSPER1Q8NEC5 780 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 OR2L5Q8NG80 312 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 SNRNP40Q96DI7 357 aaKnown RBP12.13□□□□□ -0.47
RPSA-208ENST00000487876 MAGEB10Q96LZ2 347 aaPredicted RBP12.13□□□□□ -0.47
RPSA-208ENST00000487876 QRFPRQ96P65 431 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 F2RL3Q96RI0 385 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 TXLNGYQ9BZA5 131 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 PITHD1Q9GZP4 211 aaPredicted RBP12.13□□□□□ -0.47
RPSA-208ENST00000487876 REXO4Q9GZR2 422 aaKnown RBP12.13□□□□□ -0.47
RPSA-208ENST00000487876 EPB41L4BQ9H329 900 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 EPS8L2Q9H6S3 715 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 PLA2G3Q9NZ20 509 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 C19orf25Q9UFG5 118 aaPredicted RBP12.13□□□□□ -0.47
RPSA-208ENST00000487876 ZNF180Q9UJW8 692 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 IKBKGQ9Y6K9 419 aa12.13□□□□□ -0.47
RPSA-208ENST00000487876 TGFBR3LH3BV60 316 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 SNPHO15079 494 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 RIPK2O43353 540 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 KRT38O76015 456 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 UQCRHP07919 91 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 ABHD2P08910 425 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 PCNAP12004 261 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 EPB42P16452 691 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 GNLYP22749 145 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 JAK1P23458 1154 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 ST13P50502 369 aaKnown RBP12.12□□□□□ -0.47
RPSA-208ENST00000487876 HNRNPFP52597 415 aaKnown RBP12.12□□□□□ -0.47
RPSA-208ENST00000487876 ALDH18A1P54886 795 aaKnown RBP12.12□□□□□ -0.47
RPSA-208ENST00000487876 SRSF1Q07955 248 aaKnown RBP eCLIP12.12□□□□□ -0.47
RPSA-208ENST00000487876 LAPTM5Q13571 262 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 PAGE2BQ5JRK9 111 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 FCRLBQ6BAA4 426 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 PLAG1Q6DJT9 500 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 ABHD17CQ6PCB6 329 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 QSOX2Q6ZRP7 698 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 TAOK1Q7L7X3 1001 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 UBE3DQ7Z6J8 389 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 ATCAYQ86WG3 371 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 PTGR2Q8N8N7 351 aaPredicted RBP12.12□□□□□ -0.47
RPSA-208ENST00000487876 FAM47BQ8NA70 645 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 DNAJB14Q8TBM8 379 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 ZNF473Q8WTR7 871 aaKnown RBP12.12□□□□□ -0.47
RPSA-208ENST00000487876 FAR2Q96K12 515 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 PTCHD1Q96NR3 888 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 CSF3RQ99062 836 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 NECTIN3Q9NQS3 549 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 ASF1BQ9NVP2 202 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 XPR1Q9UBH6 696 aa12.12□□□□□ -0.47
RPSA-208ENST00000487876 IGKV3D-11A0A0A0MRZ8 115 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 CCDC189A1A4V9 331 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 TCP11X1B4DZS4 312 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 PSMD12O00232 456 aaPredicted RBP12.11□□□□□ -0.47
RPSA-208ENST00000487876 RTCAO00442 366 aaKnown RBP12.11□□□□□ -0.47
RPSA-208ENST00000487876 E2F3O00716 465 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 B3GALT2O43825 422 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 MAN1A2O60476 641 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 PRMT3O60678 531 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 VPS4BO75351 444 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 EEF1DP29692 281 aaKnown RBP12.11□□□□□ -0.47
RPSA-208ENST00000487876 OR4D2P58180 307 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 ZNF33BQ06732 778 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 PCDH1Q08174 1060 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 MRPL49Q13405 166 aaKnown RBP12.11□□□□□ -0.47
RPSA-208ENST00000487876 DDX39BQ13838 428 aaKnown RBP12.11□□□□□ -0.47
RPSA-208ENST00000487876 GTF2H2Q13888 395 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 ZNF169Q14929 603 aaPredicted RBP12.11□□□□□ -0.47
RPSA-208ENST00000487876 HIST2H2ACQ16777 129 aaPredicted RBP12.11□□□□□ -0.47
RPSA-208ENST00000487876 TEX35Q5T0J7 233 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 FAM219BQ5XKK7 198 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 HIST2H2AA3Q6FI13 130 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 GRHL2Q6ISB3 625 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 GTF2H2CQ6P1K8 395 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms