RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 TRBC2A0A5B9 178 aa2.8□□□□□ -1.96
SMC4-219ENST00000487747 ANGPTL1O95841 491 aa2.8□□□□□ -1.96
SMC4-219ENST00000487747 TCF4P15884 667 aa2.8□□□□□ -1.96
SMC4-219ENST00000487747 ELK1P19419 428 aa2.8□□□□□ -1.96
SMC4-219ENST00000487747 SPRP35270 261 aaPredicted RBP2.8□□□□□ -1.96
SMC4-219ENST00000487747 RPL34P49207 117 aaKnown RBP2.8□□□□□ -1.96
SMC4-219ENST00000487747 CLNS1AP54105 237 aaKnown RBP2.8□□□□□ -1.96
SMC4-219ENST00000487747 ADARP55265 1226 aaKnown RBP2.8□□□□□ -1.96
SMC4-219ENST00000487747 PEX3P56589 373 aa2.8□□□□□ -1.96
SMC4-219ENST00000487747 RPS27AP62979 156 aaKnown RBP2.8□□□□□ -1.96
SMC4-219ENST00000487747 GRB14Q14449 540 aa2.8□□□□□ -1.96
SMC4-219ENST00000487747 ECSCRQ19T08 205 aa2.8□□□□□ -1.96
SMC4-219ENST00000487747 ZNF530Q6P9A1 599 aaPredicted RBP2.8□□□□□ -1.96
SMC4-219ENST00000487747 NHLRC1Q6VVB1 395 aa2.8□□□□□ -1.96
SMC4-219ENST00000487747 AMIGO1Q86WK6 493 aa2.8□□□□□ -1.96
SMC4-219ENST00000487747 PRSS35Q8N3Z0 413 aa2.8□□□□□ -1.96
SMC4-219ENST00000487747 ZNF558Q96NG5 402 aa2.8□□□□□ -1.96
SMC4-219ENST00000487747 MCCC1Q96RQ3 725 aaPredicted RBP2.8□□□□□ -1.96
SMC4-219ENST00000487747 PCDHB18PQ96TA0 734 aa2.8□□□□□ -1.96
SMC4-219ENST00000487747 ALKBH7Q9BT30 221 aaPredicted RBP2.8□□□□□ -1.96
SMC4-219ENST00000487747 FZD8Q9H461 694 aa2.8□□□□□ -1.96
SMC4-219ENST00000487747 ZNF275Q9NSD4 429 aaPredicted RBP2.8□□□□□ -1.96
SMC4-219ENST00000487747 EXOC1Q9NV70 894 aa2.8□□□□□ -1.96
SMC4-219ENST00000487747 ITGA11Q9UKX5 1188 aa2.8□□□□□ -1.96
SMC4-219ENST00000487747 CLEC4EQ9ULY5 219 aa2.8□□□□□ -1.96
SMC4-219ENST00000487747 AGTPBP1Q9UPW5 1226 aa2.8□□□□□ -1.96
SMC4-219ENST00000487747 ARID1AO14497 2285 aa2.79□□□□□ -1.96
SMC4-219ENST00000487747 ARID4BQ4LE39 1312 aaPredicted RBP2.79□□□□□ -1.96
SMC4-219ENST00000487747 WI2-2373I1.2A0A1W2PRP0 233 aa2.79□□□□□ -1.96
SMC4-219ENST00000487747 FBP2O00757 339 aa2.79□□□□□ -1.96
SMC4-219ENST00000487747 MYL6BP14649 208 aa2.79□□□□□ -1.96
SMC4-219ENST00000487747 GOT1P17174 413 aa2.79□□□□□ -1.96
SMC4-219ENST00000487747 IFI35P80217 286 aaPredicted RBP2.79□□□□□ -1.96
SMC4-219ENST00000487747 SULT2A1Q06520 285 aa2.79□□□□□ -1.96
SMC4-219ENST00000487747 TAZQ16635 292 aa2.79□□□□□ -1.96
SMC4-219ENST00000487747 LBHQ53QV2 105 aaPredicted RBP2.79□□□□□ -1.96
SMC4-219ENST00000487747 ARMC4Q5T2S8 1044 aa2.79□□□□□ -1.96
SMC4-219ENST00000487747 FAM219AQ8IW50 185 aa2.79□□□□□ -1.96
SMC4-219ENST00000487747 POGLUT1Q8NBL1 392 aa2.79□□□□□ -1.96
SMC4-219ENST00000487747 U2AF1L4Q8WU68 220 aaKnown RBP2.79□□□□□ -1.96
SMC4-219ENST00000487747 HSD17B14Q9BPX1 270 aa2.79□□□□□ -1.96
SMC4-219ENST00000487747 MGAT4AQ9UM21 535 aa2.79□□□□□ -1.96
SMC4-219ENST00000487747 CFAP65Q6ZU64 1925 aaKnown RBP2.78□□□□□ -1.96
SMC4-219ENST00000487747 TCP10L2B9ZVM9 353 aa2.78□□□□□ -1.96
SMC4-219ENST00000487747 HOXC4P09017 264 aaPredicted RBP2.78□□□□□ -1.96
SMC4-219ENST00000487747 EEF2P13639 858 aaKnown RBP2.78□□□□□ -1.96
SMC4-219ENST00000487747 EPORP19235 508 aa2.78□□□□□ -1.96
SMC4-219ENST00000487747 CTNNA2P26232 953 aa2.78□□□□□ -1.96
SMC4-219ENST00000487747 SSTR1P30872 391 aa2.78□□□□□ -1.96
SMC4-219ENST00000487747 ZRANB3Q5FWF4 1079 aa2.78□□□□□ -1.96
SMC4-219ENST00000487747 VWA2Q5GFL6 755 aa2.78□□□□□ -1.96
SMC4-219ENST00000487747 C9orf129Q5T035 196 aaKnown RBP2.78□□□□□ -1.96
SMC4-219ENST00000487747 ARMCX5Q6P1M9 558 aa2.78□□□□□ -1.96
SMC4-219ENST00000487747 MACC1Q6ZN28 852 aa2.78□□□□□ -1.96
SMC4-219ENST00000487747 ZNF600Q6ZNG1 722 aa2.78□□□□□ -1.96
SMC4-219ENST00000487747 RBPMS2Q6ZRY4 209 aaKnown RBP2.78□□□□□ -1.96
SMC4-219ENST00000487747 CCDC68Q9H2F9 335 aa2.78□□□□□ -1.96
SMC4-219ENST00000487747 ASB8Q9H765 288 aa2.78□□□□□ -1.96
SMC4-219ENST00000487747 TRAV18A0A075B6X5 111 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 A0A1W2PPW3 197 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 ZSCAN5CA6NGD5 496 aaPredicted RBP2.77□□□□□ -1.97
SMC4-219ENST00000487747 PRSS46E5RG02 174 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 E2F3O00716 465 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 DIAPH2O60879 1101 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 NR2F1P10589 423 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 RGRP47804 291 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 MEOX2P50222 304 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 BACE1P56817 501 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 RIPK4P57078 832 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 NEPROQ6NW34 567 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 NUFIP2Q7Z417 695 aaKnown RBP2.77□□□□□ -1.97
SMC4-219ENST00000487747 NRARPQ7Z6K4 114 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 ADGRD2Q7Z7M1 963 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 CROCCP3Q8IVE0 287 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 XXYLT1Q8NBI6 393 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 LIPHQ8WWY8 451 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 EXT2Q93063 718 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 SDHCQ99643 169 aaPredicted RBP2.77□□□□□ -1.97
SMC4-219ENST00000487747 NAP1L4Q99733 375 aaKnown RBP2.77□□□□□ -1.97
SMC4-219ENST00000487747 MAPKAP1Q9BPZ7 522 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 GTPBP2Q9BX10 602 aaKnown RBP2.77□□□□□ -1.97
SMC4-219ENST00000487747 PINK1Q9BXM7 581 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 FN3KQ9H479 309 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 C5orf66Q9H5L9 145 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 RAB9BQ9NP90 201 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 MRGBPQ9NV56 204 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 VNN3Q9NY84 501 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 WDR35Q9P2L0 1181 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 DBF4Q9UBU7 674 aaPredicted RBP2.77□□□□□ -1.97
SMC4-219ENST00000487747 UBQLN2Q9UHD9 624 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 FBXO7Q9Y3I1 522 aa2.77□□□□□ -1.97
SMC4-219ENST00000487747 FRAT2O75474 233 aaPredicted RBP2.76□□□□□ -1.97
SMC4-219ENST00000487747 RHBDL1O75783 438 aa2.76□□□□□ -1.97
SMC4-219ENST00000487747 PROS1P07225 676 aa2.76□□□□□ -1.97
SMC4-219ENST00000487747 ACAT1P24752 427 aaKnown RBP2.76□□□□□ -1.97
SMC4-219ENST00000487747 RPL9P32969 192 aaKnown RBP2.76□□□□□ -1.97
SMC4-219ENST00000487747 RGS7P49802 495 aa2.76□□□□□ -1.97
SMC4-219ENST00000487747 HNRNPA3P51991 378 aaKnown RBP2.76□□□□□ -1.97
SMC4-219ENST00000487747 HMGCS2P54868 508 aa2.76□□□□□ -1.97
SMC4-219ENST00000487747 IL10RBQ08334 325 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms