RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ZNF234Q14588 700 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 LASP1Q14847 261 aaKnown RBP11.34□□□□□ -0.59
TRA2B-214ENST00000487615 SUZ12Q15022 739 aaKnown RBP11.34□□□□□ -0.59
TRA2B-214ENST00000487615 SLC36A3Q495N2 470 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 SHQ1Q6PI26 577 aaKnown RBP11.34□□□□□ -0.59
TRA2B-214ENST00000487615 PTRH1Q86Y79 214 aaKnown RBP11.34□□□□□ -0.59
TRA2B-214ENST00000487615 RASGEF1AQ8N9B8 481 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 KXD1Q9BQD3 176 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 DKK3Q9UBP4 350 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 CDC14AQ9UNH5 594 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 USP22Q9UPT9 525 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 H3BNC9 293 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 TMCC2O75069 709 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 STX11O75558 287 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 MFN2O95140 757 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 SAGP10523 405 aaPredicted RBP11.34□□□□□ -0.59
TRA2B-214ENST00000487615 LHCGRP22888 699 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 RPP38P78345 283 aaKnown RBP11.34□□□□□ -0.59
TRA2B-214ENST00000487615 FCHO2Q0JRZ9 810 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 VEZF1Q14119 521 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 CST6Q15828 149 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 RANBP3LQ86VV4 465 aaPredicted RBP11.34□□□□□ -0.59
TRA2B-214ENST00000487615 SLC22A15Q8IZD6 547 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 OR52N2Q8NGI0 321 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 C16orf78Q8WTQ4 265 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 AP3S1Q92572 193 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 ITPAQ9BY32 194 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 UCK2Q9BZX2 261 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 TMEM27Q9HBJ8 222 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 BTNL2Q9UIR0 455 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 FBXL21Q9UKT6 434 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 ZNF451Q9Y4E5 1061 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 SCN4AP35499 1836 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 A0A0J9YVX5 310 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 SAGE2PA6NJ88 616 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 TLR4O00206 839 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 SLC1A7O00341 560 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 PRG2P13727 222 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 TACR1P25103 407 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 NPRL3Q12980 569 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 GPR149Q86SP6 731 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 TMEM151AQ8N4L1 468 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 OR56A1Q8NGH5 318 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 MAL2Q969L2 176 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 TMIGD2Q96BF3 282 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 ZNF583Q96ND8 569 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 HDHD2Q9H0R4 259 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 RHCGQ9UBD6 479 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 HCFC2Q9Y5Z7 792 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 LOC110117498-PIK3R3F6TDL0 507 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 MID1O15344 667 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 KLK8O60259 260 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 INMTO95050 263 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 PDHA2P29803 388 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 RPL4P36578 427 aaKnown RBP11.33□□□□□ -0.6
TRA2B-214ENST00000487615 BTN3A2P78410 334 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 CD47Q08722 323 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 ZNF155Q12901 538 aaPredicted RBP11.33□□□□□ -0.6
TRA2B-214ENST00000487615 NUMA1Q14980 2115 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 CYP27C1Q4G0S4 372 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 IER5LQ5T953 404 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 ZNF554Q86TJ5 538 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 CARM1Q86X55 608 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 ZNF548Q8NEK5 533 aaPredicted RBP11.33□□□□□ -0.6
TRA2B-214ENST00000487615 ZNF480Q8WV37 535 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 RFKQ969G6 155 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 TBX21Q9UL17 535 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 GLOD5A6NK44 160 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 FZD6O60353 706 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 CLPXO76031 633 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 AVPR1BP47901 424 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 ENTPD1P49961 510 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 GABARAPL2P60520 117 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 ZXDBP98169 803 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 PIGFQ07326 219 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 RGNQ15493 299 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 ZNF829Q3KNS6 432 aaPredicted RBP11.33□□□□□ -0.6
TRA2B-214ENST00000487615 FBXO43Q4G163 708 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 CPZQ66K79 652 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 MZT2AQ6P582 158 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 LINC00471Q8N535 108 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 COX18Q8N8Q8 333 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 L3MBTL4Q8NA19 623 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 LYSMD1Q96S90 227 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 SERHL2Q9H4I8 314 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 SERHLQ9NQF3 203 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 INTS6Q9UL03 887 aaKnown RBP11.33□□□□□ -0.6
TRA2B-214ENST00000487615 NEU3Q9UQ49 428 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 WBP11Q9Y2W2 641 aaKnown RBP11.33□□□□□ -0.6
TRA2B-214ENST00000487615 KNL1Q8NG31 2342 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 PLXNA1Q9UIW2 1896 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 A0A1W2PQU0 124 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 CA3P07451 260 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 TPP2P29144 1249 aaPredicted RBP11.33□□□□□ -0.6
TRA2B-214ENST00000487615 IL12AP29459 219 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 RAB15P59190 212 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 DCDC1P59894 354 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 MOGQ16653 247 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 NDUFA9Q16795 377 aa11.33□□□□□ -0.6
TRA2B-214ENST00000487615 USP30Q70CQ3 517 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms