RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 CES4AQ5XG92 561 aa18.12■□□□□ 0.49
SMPDL3A-202ENST00000487215 KIAA0408Q6ZU52 694 aa18.12■□□□□ 0.49
SMPDL3A-202ENST00000487215 ARMC2Q8NEN0 867 aa18.12■□□□□ 0.49
SMPDL3A-202ENST00000487215 SLC5A11Q8WWX8 675 aa18.12■□□□□ 0.49
SMPDL3A-202ENST00000487215 NEIL2Q969S2 332 aa18.12■□□□□ 0.49
SMPDL3A-202ENST00000487215 TMUB1Q9BVT8 246 aa18.12■□□□□ 0.49
SMPDL3A-202ENST00000487215 DEFB127Q9H1M4 99 aa18.12■□□□□ 0.49
SMPDL3A-202ENST00000487215 DEPPQ9NTK1 212 aa18.12■□□□□ 0.49
SMPDL3A-202ENST00000487215 C4orf51C9J302 202 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 SMIM10L1P0DMW3 83 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 CD99P14209 185 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 AHRP35869 848 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 IST1P53990 364 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 CDKN2DP55273 166 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 REEP5Q00765 189 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 MYBPHQ13203 477 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 CSHL1Q14406 222 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 RBM20Q5T481 1227 aaKnown RBP18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 TTC27Q6P3X3 843 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 ACAD11Q709F0 780 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 CA13Q8N1Q1 262 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 ANKRD53Q8N9V6 530 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 C2CD4AQ8NCU7 369 aaPredicted RBP18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 SMIM10Q96HG1 83 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 PDLIM2Q96JY6 352 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 SIGLEC10Q96LC7 697 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 KLHL31Q9H511 634 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 TIMMDC1Q9NPL8 285 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 KCMF1Q9P0J7 381 aa18.11■□□□□ 0.49
SMPDL3A-202ENST00000487215 PINLYPA6NC86 204 aa18.1■□□□□ 0.49
SMPDL3A-202ENST00000487215 KLK8O60259 260 aa18.1■□□□□ 0.49
SMPDL3A-202ENST00000487215 TUBB4AP04350 444 aa18.1■□□□□ 0.49
SMPDL3A-202ENST00000487215 GABRB3P28472 473 aa18.1■□□□□ 0.49
SMPDL3A-202ENST00000487215 SSR4P51571 173 aa18.1■□□□□ 0.49
SMPDL3A-202ENST00000487215 AP1S2P56377 157 aa18.1■□□□□ 0.49
SMPDL3A-202ENST00000487215 TERF2Q15554 542 aa18.1■□□□□ 0.49
SMPDL3A-202ENST00000487215 PAOXQ6QHF9 649 aa18.1■□□□□ 0.49
SMPDL3A-202ENST00000487215 C16orf47Q6ZP98 133 aaPredicted RBP18.1■□□□□ 0.49
SMPDL3A-202ENST00000487215 PSD4Q8NDX1 1056 aa18.1■□□□□ 0.49
SMPDL3A-202ENST00000487215 OR5M3Q8NGP4 307 aa18.1■□□□□ 0.49
SMPDL3A-202ENST00000487215 FBXL8Q96CD0 374 aa18.1■□□□□ 0.49
SMPDL3A-202ENST00000487215 VMP1Q96GC9 406 aa18.1■□□□□ 0.49
SMPDL3A-202ENST00000487215 TSNARE1Q96NA8 513 aa18.1■□□□□ 0.49
SMPDL3A-202ENST00000487215 AICDAQ9GZX7 198 aa18.1■□□□□ 0.49
SMPDL3A-202ENST00000487215 PNPLA3Q9NST1 481 aa18.1■□□□□ 0.49
SMPDL3A-202ENST00000487215 PPIEQ9UNP9 301 aaKnown RBP18.1■□□□□ 0.49
SMPDL3A-202ENST00000487215 MMACHCQ9Y4U1 282 aa18.1■□□□□ 0.49
SMPDL3A-202ENST00000487215 SPG11Q96JI7 2443 aa18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 PABPN1LA6NDY0 278 aaKnown RBP18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 URADA6NGE7 173 aa18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 FAM166BA8MTA8 275 aa18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 NPIPA2E9PIF3 369 aa18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 NPIPA3F8WFD2 350 aa18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 PRKNO60260 465 aaPredicted RBP18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 ZWINTO95229 277 aa18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 PPP2R1BP30154 601 aa18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 CXCR5P32302 372 aa18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 PPIAP62937 165 aaKnown RBP18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 GXYLT1Q4G148 440 aa18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 ZNF662Q6ZS27 426 aa18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 TRPV3Q8NET8 790 aa18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 NCLNQ969V3 563 aa18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 ZDHHC11Q9H8X9 412 aa18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 PNO1Q9NRX1 252 aaKnown RBP18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 ERVK-11Q9UQG0 969 aa18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 YARS2Q9Y2Z4 477 aaKnown RBP18.09■□□□□ 0.49
SMPDL3A-202ENST00000487215 A8MVJ9 347 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 TGFBR3LH3BV60 316 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 GUCA1CO95843 209 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 CCDC175P0C221 793 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 HOXB4P17483 251 aaPredicted RBP18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 GPR143P51810 404 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 PGGT1BP53609 377 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 IL2P60568 153 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 PLGLB1Q02325 96 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 TOR1AIP1Q5JTV8 583 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 TMPRSS11BQ86T26 416 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 SCUBE1Q8IWY4 988 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 CLYBLQ8N0X4 340 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 TRIM58Q8NG06 486 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 OR2M7Q8NG81 312 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 OR5M9Q8NGP3 310 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 CREB3L4Q8TEY5 395 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 ATL1Q8WXF7 558 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 FOXC2Q99958 501 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 CCDC77Q9BR77 488 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 TRIM54Q9BYV2 358 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 CXXC4Q9H2H0 198 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 LIN28AQ9H9Z2 209 aaKnown RBP18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 PELI2Q9HAT8 420 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 SLC24A3Q9HC58 644 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 HPF1Q9NWY4 346 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 CLDN16Q9Y5I7 305 aa18.08■□□□□ 0.48
SMPDL3A-202ENST00000487215 INTS1Q8N201 2190 aaKnown RBP18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 A0A0G2JMM0 328 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 A0A1W2PPB8 328 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 A0A1W2PRS3 328 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 FAM221AA4D161 298 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 TMEM200CA6NKL6 621 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms