RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 LYPLA1O75608 230 aaPredicted RBP18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 PLA2G16P53816 162 aa18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 MTTPP55157 894 aa18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 DNASE1L3Q13609 305 aa18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 NCF4Q15080 339 aa18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 UGT3A2Q3SY77 523 aa18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 SH2D4BQ5SQS7 431 aa18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 CLEC6AQ6EIG7 209 aa18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 TRIM46Q7Z4K8 759 aa18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 ZNF75CPQ92670 426 aaPredicted RBP18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 KIAA1143Q96AT1 154 aaPredicted RBP18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 SERINC2Q96SA4 455 aa18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 SORT1Q99523 831 aa18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 TGIF2Q9GZN2 237 aa18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 ZNF395Q9H8N7 513 aaPredicted RBP18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 AHSPQ9NZD4 102 aa18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 GPN3Q9UHW5 284 aaPredicted RBP18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 FARSAQ9Y285 508 aaKnown RBP18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 DNAJC15Q9Y5T4 150 aa18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 AHCTF1Q8WYP5 2266 aa18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 VSTM2BA6NLU5 285 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 PLPP1O14494 284 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 KLK10O43240 276 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 SH3BGRLO75368 114 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 CHEK2O96017 543 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 IL10P22301 178 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 RAP1GDS1P52306 607 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 RPS15P62841 145 aaKnown RBP18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 BTN3A2P78410 334 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 AP5B1Q2VPB7 878 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 MLIPQ5VWP3 458 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 FAM219BQ5XKK7 198 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 OR4C11Q6IEV9 310 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 MED25Q71SY5 747 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 METTL4Q8N3J2 472 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 OR51Q1Q8NH59 317 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 NAF1Q96HR8 494 aaKnown RBP18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 ZNF717Q9BY31 904 aaPredicted RBP18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 WDR54Q9H977 334 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 MKKSQ9NPJ1 570 aaPredicted RBP18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 VPS29Q9UBQ0 182 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 ZNF282Q9UDV7 671 aaPredicted RBP18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 SLC12A4Q9UP95 1085 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 AKAP13Q12802 2813 aa18.34■□□□□ 0.53
PCOLCE-208ENST00000487172 A0A087WV48 116 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 A0A0G2JN53 185 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 NPIPB8E9PQR5 432 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 B3GALT2O43825 422 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 RDH16O75452 317 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 RECKO95980 971 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 B3GALT4O96024 378 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 LIFP15018 202 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 HIST1H1TP22492 207 aaPredicted RBP18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 F8A1P23610 371 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 ATP5A1P25705 553 aaKnown RBP18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 PTPN4P29074 926 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 BSGP35613 385 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 RPL14P50914 215 aaKnown RBP18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 OCA2Q04671 838 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 TBL3Q12788 808 aaKnown RBP18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 NKG7Q16617 165 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 ZNF793Q6ZN11 406 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 ZCCHC7Q8N3Z6 543 aaKnown RBP18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 ZNF781Q8N8C0 355 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 DYDC1Q8WWB3 177 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 CKAP2Q8WWK9 683 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 METTL2AQ96IZ6 378 aaKnown RBP18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 HBEGFQ99075 208 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 CCT7Q99832 543 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 ACPTQ9BZG2 426 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 DDX31Q9H8H2 851 aaKnown RBP18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 COPS7BQ9H9Q2 264 aaPredicted RBP18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 GPN2Q9H9Y4 310 aaPredicted RBP18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 TRPC4Q9UBN4 977 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 ADAM29Q9UKF5 820 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 NXT1Q9UKK6 140 aaKnown RBP18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 PADI2Q9Y2J8 665 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 RAXQ9Y2V3 346 aa18.33■□□□□ 0.52
PCOLCE-208ENST00000487172 TMEM233B4DJY2 109 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 SLC28A1O00337 649 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 SAP18O00422 153 aaKnown RBP18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 RTCAO00442 366 aaKnown RBP18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 CHST10O43529 356 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 CNOT3O75175 753 aaKnown RBP18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 KLF7O75840 302 aaPredicted RBP18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 PRPH2P23942 346 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 SSR2P43308 183 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 MAT1AQ00266 395 aaKnown RBP18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 OCRLQ01968 901 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 RUNX2Q13950 521 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 SLC9A5Q14940 896 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 SCIMPQ6UWF3 145 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 LRRC69Q6ZNQ3 347 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 SPACA3Q8IXA5 215 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 CA13Q8N1Q1 262 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 ENDOVQ8N8Q3 282 aaKnown RBP18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 ACOT4Q8N9L9 421 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 OR5T3Q8NGG3 340 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 STT3BQ8TCJ2 826 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 CHTF18Q8WVB6 975 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms