RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 E2F3O00716 465 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 STX16O14662 325 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 CHST10O43529 356 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 KLK8O60259 260 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 KLHL41O60662 606 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 PRAMEF4O60810 478 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 SEC24DO94855 1032 aaPredicted RBP9.64□□□□□ -0.87
NEK4-204ENST00000487068 HPP00738 406 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 TGFB1P01137 390 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 FHP07954 510 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 EPORP19235 508 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 CERS1P27544 350 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 SERPINB1P30740 379 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 SSR2P43308 183 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 HYAL2Q12891 473 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 KLRB1Q12918 225 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 VWA5B1Q5TIE3 1220 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 PRAMEF9Q5VWM5 478 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 WDR93Q6P2C0 686 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 KIRREL2Q6UWL6 708 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 TIFABQ6ZNK6 161 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 LANCL3Q6ZV70 420 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 LCA5Q86VQ0 697 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 CYP4X1Q8N118 509 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 AFAP1L2Q8N4X5 818 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 FAM47BQ8NA70 645 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 OR2L5Q8NG80 312 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 OR2W6PQ8NHA6 318 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 TM9SF4Q92544 642 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 TBC1D20Q96BZ9 403 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 MS4A6EQ96DS6 147 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 WDR34Q96EX3 536 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 THOC3Q96J01 351 aaKnown RBP9.64□□□□□ -0.87
NEK4-204ENST00000487068 NSUN5Q96P11 429 aaKnown RBP9.64□□□□□ -0.87
NEK4-204ENST00000487068 KCNC2Q96PR1 638 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 CDK15Q96Q40 435 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 F2RL3Q96RI0 385 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 MTERF1Q99551 399 aaKnown RBP9.64□□□□□ -0.87
NEK4-204ENST00000487068 MESP1Q9BRJ9 268 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 NOL11Q9H8H0 719 aaKnown RBP9.64□□□□□ -0.87
NEK4-204ENST00000487068 TMEM216Q9P0N5 145 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 MAP10Q9P2G4 905 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 PCTPQ9UKL6 214 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 MRPS33Q9Y291 106 aaKnown RBP9.64□□□□□ -0.87
NEK4-204ENST00000487068 PCDHGA9Q9Y5G4 932 aaKnown RBP9.64□□□□□ -0.87
NEK4-204ENST00000487068 PCDHGA11Q9Y5H2 935 aa9.64□□□□□ -0.87
NEK4-204ENST00000487068 IGHV1-45A0A0A0MS14 117 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 IGHV3-20A0A0C4DH32 117 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 A0A1W2PPM1 405 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 LRIT2A6NDA9 550 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 OR2W5A6NFC9 320 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 FOXO6A8MYZ6 492 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 K7EM74 188 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 COPEO14579 308 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 PCDH17O14917 1159 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 SUV39H1O43463 412 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 UGDHO60701 494 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 DPM1O60762 260 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 WFS1O76024 890 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 SUPT7LO94864 414 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 CLDN9O95484 217 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 GSTA1P08263 222 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 MYL2P10916 166 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 COX6A1P12074 109 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 IL10P22301 178 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 DEKP35659 375 aaKnown RBP9.63□□□□□ -0.87
NEK4-204ENST00000487068 ACTN3Q08043 901 aaPredicted RBP9.63□□□□□ -0.87
NEK4-204ENST00000487068 MYBPC3Q14896 1274 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 NSDHLQ15738 373 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 BTBD16Q32M84 506 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 LIPJQ5W064 366 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 METTL2BQ6P1Q9 378 aaKnown RBP9.63□□□□□ -0.87
NEK4-204ENST00000487068 CHSY3Q70JA7 882 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 RPS27LQ71UM5 84 aaKnown RBP9.63□□□□□ -0.87
NEK4-204ENST00000487068 NDUFAF7Q7L592 441 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 KBTBD2Q8IY47 623 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 C4orf33Q8N1A6 199 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 CA13Q8N1Q1 262 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 RNF175Q8N4F7 328 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 SRFBP1Q8NEF9 429 aaKnown RBP9.63□□□□□ -0.87
NEK4-204ENST00000487068 ARMC2Q8NEN0 867 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 OR7G3Q8NG95 312 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 OR52B6Q8NGF0 335 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 HUS1BQ8NHY5 278 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 AENQ8WTP8 325 aaKnown RBP9.63□□□□□ -0.87
NEK4-204ENST00000487068 CMTM7Q96FZ5 175 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 SERINC2Q96SA4 455 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 MS4A8Q9BY19 250 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 ROGDIQ9GZN7 287 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 LHPPQ9H008 270 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 EPS8L2Q9H6S3 715 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 LUZP4Q9P127 313 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 COPG2Q9UBF2 871 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 DCDC2Q9UHG0 476 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 ADGRE2Q9UHX3 823 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 ANAPC2Q9UJX6 822 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 ZNF490Q9ULM2 529 aaPredicted RBP9.63□□□□□ -0.87
NEK4-204ENST00000487068 SPACA6W5XKT8 324 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 PTPN13Q12923 2485 aa9.63□□□□□ -0.87
NEK4-204ENST00000487068 DOPEY2Q9Y3R5 2298 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms