RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 VPS50Q96JG6 964 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 KCNC2Q96PR1 638 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 ZNF382Q96SR6 550 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 ARHGAP9Q9BRR9 750 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 HCN3Q9P1Z3 774 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 FBXL4Q9UKA2 621 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 PLLPQ9Y342 182 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 PCDHGB7Q9Y5F8 929 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 A0A088AWK7 358 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 IGKV3D-11A0A0A0MRZ8 115 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 TLDC2A0PJX2 215 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 MKRN2OSH3BPM6 223 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 COPEO14579 308 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 ALOX12BO75342 701 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 JRKO75564 520 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 DNAJB5O75953 348 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 SEMA3DO95025 777 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 HPP00738 406 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 FHP07954 510 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 COX6A1P12074 109 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 RNH1P13489 461 aaKnown RBP12.41□□□□□ -0.42
SF1-216ENST00000486867 ACPPP15309 386 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 ZNF10P21506 573 aaPredicted RBP12.41□□□□□ -0.42
SF1-216ENST00000486867 CCNG1P51959 295 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 MTTPP55157 894 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 CLCQ05315 142 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 TGM3Q08188 693 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 AIMP2Q13155 320 aaKnown RBP12.41□□□□□ -0.42
SF1-216ENST00000486867 CUL3Q13618 768 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 RUNX2Q13950 521 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 ZRSR2Q15696 482 aaKnown RBP12.41□□□□□ -0.42
SF1-216ENST00000486867 KHDRBS2Q5VWX1 349 aaKnown RBP12.41□□□□□ -0.42
SF1-216ENST00000486867 LETMD1Q6P1Q0 360 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 TRIM40Q6P9F5 258 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 QSOX2Q6ZRP7 698 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 CHSY3Q70JA7 882 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 RPS27LQ71UM5 84 aaKnown RBP12.41□□□□□ -0.42
SF1-216ENST00000486867 CA13Q8N1Q1 262 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 ADAMTS18Q8TE60 1221 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 ABHD17AQ96GS6 310 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 F2RL3Q96RI0 385 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 SERINC2Q96SA4 455 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 MESP1Q9BRJ9 268 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 TBCDQ9BTW9 1192 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 ZNF717Q9BY31 904 aaPredicted RBP12.41□□□□□ -0.42
SF1-216ENST00000486867 ROGDIQ9GZN7 287 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 ZNF700Q9H0M5 742 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 SLC25A18Q9H1K4 315 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 GSTO2Q9H4Y5 243 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 KCMF1Q9P0J7 381 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 SENP1Q9P0U3 644 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 TRPS1Q9UHF7 1281 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 MKL2Q9ULH7 1088 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 STK38LQ9Y2H1 464 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 ZNF462Q96JM2 2506 aa12.41□□□□□ -0.42
SF1-216ENST00000486867 PRRC2CQ9Y520 2896 aaKnown RBP12.4□□□□□ -0.42
SF1-216ENST00000486867 IGHV1-45A0A0A0MS14 117 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 MAGEB17A8MXT2 336 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 PPP6CO00743 305 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 MLYCDO95822 493 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 HEXBP07686 556 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 MYL2P10916 166 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 JAK1P23458 1154 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 ATP5A1P25705 553 aaKnown RBP12.4□□□□□ -0.42
SF1-216ENST00000486867 PTX3P26022 381 aaPredicted RBP12.4□□□□□ -0.42
SF1-216ENST00000486867 CDH13P55290 713 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 BTN3A2P78410 334 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 ZNF33BQ06732 778 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 LCP2Q13094 533 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 CHAF1BQ13112 559 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 PCOLCEQ15113 449 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 CPSF6Q16630 551 aaKnown RBP eCLIP12.4□□□□□ -0.42
SF1-216ENST00000486867 BEND6Q5SZJ8 279 aaPredicted RBP12.4□□□□□ -0.42
SF1-216ENST00000486867 FRG2Q64ET8 278 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 LRIG3Q6UXM1 1119 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 ZNF793Q6ZN11 406 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 CROCCP2Q86T23 111 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 SCUBE1Q8IWY4 988 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 PRSS58Q8IYP2 241 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 C4orf33Q8N1A6 199 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 OR4F6Q8NGB9 312 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 C9orf43Q8TAL5 461 aaPredicted RBP12.4□□□□□ -0.42
SF1-216ENST00000486867 CCT6BQ92526 530 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 PEX11GQ96HA9 241 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 FAR2Q96K12 515 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 IMMP1LQ96LU5 166 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 CDK15Q96Q40 435 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 FRG2BQ96QU4 278 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 SMAD5Q99717 465 aaKnown RBP12.4□□□□□ -0.42
SF1-216ENST00000486867 WDR77Q9BQA1 342 aaPredicted RBP12.4□□□□□ -0.42
SF1-216ENST00000486867 LYRM4Q9HD34 91 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 SEMA4BQ9NPR2 832 aaPredicted RBP12.4□□□□□ -0.42
SF1-216ENST00000486867 ATP13A2Q9NQ11 1180 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 ACSS2Q9NR19 701 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 OXSMQ9NWU1 459 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 MID2Q9UJV3 735 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 DAPP1Q9UN19 280 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 CLDN16Q9Y5I7 305 aa12.4□□□□□ -0.42
SF1-216ENST00000486867 SERTM1A2A2V5 107 aa12.39□□□□□ -0.43
SF1-216ENST00000486867 H3BQF6 201 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms