RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 C6orf141Q5SZD1 244 aa12.7□□□□□ -0.38
HMGN1-216ENST00000486741 RNF111Q6ZNA4 994 aa12.7□□□□□ -0.38
HMGN1-216ENST00000486741 OR4N5Q8IXE1 308 aa12.7□□□□□ -0.38
HMGN1-216ENST00000486741 BTBD1Q9H0C5 482 aa12.7□□□□□ -0.38
HMGN1-216ENST00000486741 FAM118AQ9NWS6 357 aa12.7□□□□□ -0.38
HMGN1-216ENST00000486741 EHD3Q9NZN3 535 aa12.7□□□□□ -0.38
HMGN1-216ENST00000486741 RBBP6Q7Z6E9 1792 aaKnown RBP12.7□□□□□ -0.38
HMGN1-216ENST00000486741 ZNF99A8MXY4 864 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-216ENST00000486741 PRRT4C9JH25 899 aa12.7□□□□□ -0.38
HMGN1-216ENST00000486741 RNGTTO60942 597 aaKnown RBP12.7□□□□□ -0.38
HMGN1-216ENST00000486741 CH25HO95992 272 aa12.7□□□□□ -0.38
HMGN1-216ENST00000486741 ZNF26P17031 533 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-216ENST00000486741 GNA13Q14344 377 aa12.7□□□□□ -0.38
HMGN1-216ENST00000486741 UBXN2BQ14CS0 331 aa12.7□□□□□ -0.38
HMGN1-216ENST00000486741 MINDY4Q4G0A6 757 aa12.7□□□□□ -0.38
HMGN1-216ENST00000486741 RUNDC3AQ59EK9 446 aa12.7□□□□□ -0.38
HMGN1-216ENST00000486741 CAMKK1Q8N5S9 505 aa12.7□□□□□ -0.38
HMGN1-216ENST00000486741 KRCC1Q9NPI7 259 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-216ENST00000486741 ZDHHC7Q9NXF8 308 aa12.7□□□□□ -0.38
HMGN1-216ENST00000486741 CROCCQ5TZA2 2017 aa12.7□□□□□ -0.38
HMGN1-216ENST00000486741 CAPN5O15484 640 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-216ENST00000486741 CD160O95971 181 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 LAMP2P13473 410 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 BMP7P18075 431 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 DCTP40126 519 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 TMEM150AQ86TG1 271 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 C1GALT1C1Q96EU7 318 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 ZNF597Q96LX8 424 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 CNPPD1Q9BV87 410 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 TM9SF3Q9HD45 589 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 CD300AQ9UGN4 299 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 ZNF225Q9UK10 706 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 H3BQ06 376 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-216ENST00000486741 AIREO43918 545 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 SAGP10523 405 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-216ENST00000486741 CD36P16671 472 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 AGXTP21549 392 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 IMPA1P29218 277 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 GPNMBQ14956 572 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 RGS21Q2M5E4 152 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-216ENST00000486741 ADIPOR2Q86V24 386 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 C16orf78Q8WTQ4 265 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 CHFRQ96EP1 664 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 RSPH9Q9H1X1 276 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-216ENST00000486741 PCDHGB5Q9Y5G0 923 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 VEGFDO43915 354 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 FZD6O60353 706 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 APOL3O95236 402 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 ASGR2P07307 311 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 CD247P20963 164 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 MPIP34949 423 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 ZNHIT3Q15649 155 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-216ENST00000486741 DEFB134Q4QY38 66 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 GRHL2Q6ISB3 625 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 SPRED2Q7Z698 418 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 IQCHQ86VS3 1027 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 CADM2Q8N3J6 435 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 GPR151Q8TDV0 419 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 TFAP2CQ92754 450 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 MTERF3Q96E29 417 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 ALPK1Q96QP1 1244 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 SLC6A17Q9H1V8 727 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 ZNF696Q9H7X3 374 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 PRDM8Q9NQV8 689 aa12.69□□□□□ -0.38
HMGN1-216ENST00000486741 RP1L1Q8IWN7 2480 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-216ENST00000486741 DYRK3O43781 588 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 TFAP2AP05549 437 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 ANXA8P13928 327 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 ITGB7P26010 798 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 GJA4P35212 333 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 ENTPD1P49961 510 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 PGDP52209 483 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 CRISP3P54108 245 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 CMPK2Q5EBM0 449 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 ARMC4Q5T2S8 1044 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 HMBOX1Q6NT76 420 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 Q6ZNB5 142 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 ZZZ3Q8IYH5 903 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 GHDCQ8N2G8 530 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 POC5Q8NA72 575 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 GEMIN6Q8WXD5 167 aaKnown RBP12.68□□□□□ -0.38
HMGN1-216ENST00000486741 POP5Q969H6 163 aaKnown RBP12.68□□□□□ -0.38
HMGN1-216ENST00000486741 SLC38A4Q969I6 547 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 ISOC1Q96CN7 298 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 Q96MT0 163 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 SLC38A2Q96QD8 506 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 FEVQ99581 238 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 SLC17A9Q9BYT1 436 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 CLMPQ9H6B4 373 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 CUEDC1Q9NWM3 386 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-216ENST00000486741 ERVK-18Q9QC07 812 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 C1orf105O95561 183 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 STT3AP46977 705 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 RPP38P78345 283 aaKnown RBP12.68□□□□□ -0.38
HMGN1-216ENST00000486741 MLLT1Q03111 559 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-216ENST00000486741 CD47Q08722 323 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 PMS2P3Q13401 168 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 CRB2Q5IJ48 1285 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 TMEM240Q5SV17 173 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms