RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ATAD3AQ9NVI7 634 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 PPP1R3CQ9UQK1 317 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 ERVK-19Q9WJR5 959 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 KCNK6Q9Y257 313 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 MRPS28Q9Y2Q9 187 aaKnown RBP3.97□□□□□ -1.77
SMC4-218ENST00000486711 TDRKHQ9Y2W6 561 aaKnown RBP3.97□□□□□ -1.77
SMC4-218ENST00000486711 KIAA1210Q9ULL0 1709 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 TMEM129A0AVI4 362 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 MEIOCA2RUB1 952 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 C5orf51A6NDU8 294 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 SERINC4A6NH21 518 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 C15orf61A6NNL5 157 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 SURF4O15260 269 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 HSF2BPO75031 334 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 NXPH2O95156 264 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 SOX3P41225 446 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 CLCN4P51793 760 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 CSNK2BP67870 215 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 GALK2Q01415 458 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 CEACAM7Q14002 265 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 HLA-BQ31612 363 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 TMEM30BQ3MIR4 351 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 FAM106AQ4KMX7 169 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 WLSQ5T9L3 541 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 ARHGAP11AQ6P4F7 1023 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 CD164L2Q6UWJ8 174 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 C17orf107Q6ZR85 190 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 C5orf24Q7Z6I8 188 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 ZNF410Q86VK4 478 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 SERPINA12Q8IW75 414 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 ELMOD1Q8N336 334 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 CLEC1AQ8NC01 280 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 OR13C5Q8NGS8 318 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 GANCQ8TET4 914 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 FAM46BQ96A09 425 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 EPSTI1Q96J88 318 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 C2orf48Q96LS8 159 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 GUCD1Q96NT3 240 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 NAP1L3Q99457 506 aaPredicted RBP3.96□□□□□ -1.78
SMC4-218ENST00000486711 DGCR6LQ9BY27 220 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 TSPYL1Q9H0U9 437 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 PRMT8Q9NR22 394 aaPredicted RBP3.96□□□□□ -1.78
SMC4-218ENST00000486711 ZCCHC3Q9NUD5 404 aaKnown RBP3.96□□□□□ -1.78
SMC4-218ENST00000486711 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.96□□□□□ -1.78
SMC4-218ENST00000486711 CYP39A1Q9NYL5 469 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 MIS18AQ9NYP9 233 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 TEKT2Q9UIF3 430 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 APPL1Q9UKG1 709 aa3.96□□□□□ -1.78
SMC4-218ENST00000486711 FOXA2Q9Y261 457 aaPredicted RBP3.96□□□□□ -1.78
SMC4-218ENST00000486711 DISP3Q9P2K9 1392 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 IGKV3D-15A0A087WSY6 115 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 hCG_38984A0A1B0GV85 526 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 A0A1W2PR80 420 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 SLC15A5A6NIM6 579 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 CHUKO15111 745 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 SYT7O43581 403 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 ATP6V1G1O75348 118 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 IGLV1-44P01699 117 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 IGHEP01854 428 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 GIFP27352 417 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 KCNK10P57789 538 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 CNTN1Q12860 1018 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 TRA2AQ13595 282 aaKnown RBP eCLIP3.95□□□□□ -1.78
SMC4-218ENST00000486711 HFEQ30201 348 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 LYPLAL1Q5VWZ2 237 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 ZNF776Q68DI1 518 aaPredicted RBP3.95□□□□□ -1.78
SMC4-218ENST00000486711 ZNF772Q68DY9 489 aaPredicted RBP3.95□□□□□ -1.78
SMC4-218ENST00000486711 ARHGAP17Q68EM7 881 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 B3GLCTQ6Y288 498 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 ZC3H3Q8IXZ2 948 aaKnown RBP3.95□□□□□ -1.78
SMC4-218ENST00000486711 DCLK2Q8N568 766 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 ZNF248Q8NDW4 579 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 SPATA18Q8TC71 538 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 HCAR2Q8TDS4 363 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 SAP25Q8TEE9 199 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 HAS2Q92819 552 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 BPIFA2Q96DR5 249 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 ZNF274Q96GC6 653 aaPredicted RBP3.95□□□□□ -1.78
SMC4-218ENST00000486711 LURAP1Q96LR2 239 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 PRAM1Q96QH2 718 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 HOXD1Q9GZZ0 328 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 ABCG8Q9H221 673 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 MTHFD2LQ9H903 347 aaPredicted RBP3.95□□□□□ -1.78
SMC4-218ENST00000486711 LNPEPQ9UIQ6 1025 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 PLCL2Q9UPR0 1127 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 ANGPTL3Q9Y5C1 460 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 ETV7Q9Y603 341 aa3.95□□□□□ -1.78
SMC4-218ENST00000486711 SPAG9O60271 1321 aaKnown RBP3.95□□□□□ -1.78
SMC4-218ENST00000486711 TP53BP1Q12888 1972 aaPredicted RBP3.94□□□□□ -1.78
SMC4-218ENST00000486711 COL2A1P02458 1487 aaPredicted RBP3.94□□□□□ -1.78
SMC4-218ENST00000486711 TRBV2A0A0J9YWF9 115 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 IQCMA0A1B0GVH7 501 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 MAGEB2O15479 319 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 MLNRO43193 412 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 PSMD3O43242 534 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 HTATSF1O43719 755 aaKnown RBP3.94□□□□□ -1.78
SMC4-218ENST00000486711 VEGFDO43915 354 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 GMNNO75496 209 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 KRT5P13647 590 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 ANPEPP15144 967 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms