RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 NOD2Q9HC29 1040 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 SAYSD1Q9NPB0 183 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 GPR83Q9NYM4 423 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 SAMD15Q9P1V8 674 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 ENTPD4Q9Y227 616 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 LIPT1Q9Y234 373 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 POLR3KQ9Y2Y1 108 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-209ENST00000486618 CLCA3PQ9Y6N3 262 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 ITPR3Q14573 2671 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 MED13LQ71F56 2210 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 MYO7BQ6PIF6 2116 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 FBN2P35556 2912 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 A0A0J9YYE9 177 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 LOC100506127A0A0U1RQW1 187 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 A0A1B0GWJ7 208 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 hCG_1809904A0A1W2PP81 198 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 A0A1W2PPE2 198 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 A0A1W2PR64 198 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 A4D1N5 150 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 H0Y8G0 127 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 GRID2O43424 1007 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 NUAK1O60285 661 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 CLN5O75503 358 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 METTL18O95568 372 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 OTCP00480 354 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 TRBC1P01850 177 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 ESR1P03372 595 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 TPOP07202 933 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 KLK3P07288 261 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-209ENST00000486618 FESP07332 822 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 POU2F1P14859 743 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 ANPEPP15144 967 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 NELFEP18615 380 aaKnown RBP6.52□□□□□ -1.37
HDAC3-209ENST00000486618 GRK5P34947 590 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 HSPA13P48723 471 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 HCAR3P49019 387 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 BMXP51813 675 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 RRADP55042 308 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 ITGA1P56199 1179 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 EIF3EP60228 445 aaKnown RBP6.52□□□□□ -1.37
HDAC3-209ENST00000486618 RPS18P62269 152 aaKnown RBP6.52□□□□□ -1.37
HDAC3-209ENST00000486618 PHEXP78562 749 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 NIPAL4Q0D2K0 466 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 TUBB3Q13509 450 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 TYSND1Q2T9J0 566 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 MIIPQ5JXC2 388 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 MARC1Q5VT66 337 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 PWWP2BQ6NUJ5 590 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 FAM199XQ6PEV8 388 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-209ENST00000486618 RFLNAQ6ZTI6 216 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 MED25Q71SY5 747 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 ARMC8Q8IUR7 673 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 ARFGAP1Q8N6T3 406 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 RBMXL3Q8N7X1 1067 aaKnown RBP6.52□□□□□ -1.37
HDAC3-209ENST00000486618 MLKLQ8NB16 471 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 HIPK4Q8NE63 616 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 OR13C2Q8NGS9 318 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 ZNF671Q8TAW3 534 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 SETD6Q8TBK2 473 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 PIH1D2Q8WWB5 315 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 MAIP1Q8WWC4 291 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 MR1Q95460 341 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 SNRNP40Q96DI7 357 aaKnown RBP6.52□□□□□ -1.37
HDAC3-209ENST00000486618 CHMP6Q96FZ7 201 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 KIRREL1Q96J84 757 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 AGAP2Q99490 1192 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 CGREF1Q99674 301 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 MGME1Q9BQP7 344 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 C9orf16Q9BUW7 83 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 NTMT1Q9BV86 223 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 RAB33BQ9H082 229 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 OSGEPL1Q9H4B0 414 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 RAD21L1Q9H4I0 556 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 TFB2MQ9H5Q4 396 aaKnown RBP6.52□□□□□ -1.37
HDAC3-209ENST00000486618 KLC4Q9NSK0 619 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 DDX28Q9NUL7 540 aaKnown RBP6.52□□□□□ -1.37
HDAC3-209ENST00000486618 POT1Q9NUX5 634 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 TMEM184CQ9NVA4 438 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 GPATCH2LQ9NWQ4 482 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 SELENONQ9NZV5 590 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 SLAMF8Q9P0V8 285 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 WHRNQ9P202 907 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 EPHA6Q9UF33 1036 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 PCDHB10Q9UN67 800 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 GAB2Q9UQC2 676 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 RPH3AQ9Y2J0 694 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-209ENST00000486618 NPFFR2Q9Y5X5 522 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 FER1L5A0AVI2 2057 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 PKDREJQ9NTG1 2253 aa6.52□□□□□ -1.37
HDAC3-209ENST00000486618 NAV3Q8IVL0 2385 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 CCDC168Q8NDH2 2452 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 PDZK1P1A8MUH7 402 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 DVL2O14641 736 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 ZNF185O15231 689 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 IDH3BO43837 385 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 GUCY1B2O75343 617 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 RNF8O76064 485 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 ATE1O95260 518 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 HTR3BO95264 441 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 IL1AP01583 271 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms