RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 BTBD16Q32M84 506 aa18.38■□□□□ 0.53
SNX5-213ENST00000486039 SFT2D3Q587I9 215 aa18.38■□□□□ 0.53
SNX5-213ENST00000486039 PLAG1Q6DJT9 500 aa18.38■□□□□ 0.53
SNX5-213ENST00000486039 DCAKDQ8WVC6 231 aa18.38■□□□□ 0.53
SNX5-213ENST00000486039 CNDP1Q96KN2 507 aa18.38■□□□□ 0.53
SNX5-213ENST00000486039 REXO4Q9GZR2 422 aaKnown RBP18.38■□□□□ 0.53
SNX5-213ENST00000486039 ASF1BQ9NVP2 202 aa18.38■□□□□ 0.53
SNX5-213ENST00000486039 ZNF358Q9NW07 568 aa18.38■□□□□ 0.53
SNX5-213ENST00000486039 MAP10Q9P2G4 905 aa18.38■□□□□ 0.53
SNX5-213ENST00000486039 OPTCQ9UBM4 332 aa18.38■□□□□ 0.53
SNX5-213ENST00000486039 NTNG1Q9Y2I2 539 aa18.38■□□□□ 0.53
SNX5-213ENST00000486039 SHANK1Q9Y566 2161 aa18.37■□□□□ 0.53
SNX5-213ENST00000486039 POC1B-GALNT4F8VUJ3 575 aa18.37■□□□□ 0.53
SNX5-213ENST00000486039 RHOXF2BP0C7M4 288 aa18.37■□□□□ 0.53
SNX5-213ENST00000486039 RNH1P13489 461 aaKnown RBP18.37■□□□□ 0.53
SNX5-213ENST00000486039 SERPINB9P50453 376 aa18.37■□□□□ 0.53
SNX5-213ENST00000486039 AP2B1P63010 937 aa18.37■□□□□ 0.53
SNX5-213ENST00000486039 ZNF169Q14929 603 aaPredicted RBP18.37■□□□□ 0.53
SNX5-213ENST00000486039 SETDB1Q15047 1291 aa18.37■□□□□ 0.53
SNX5-213ENST00000486039 PFKFB4Q16877 469 aa18.37■□□□□ 0.53
SNX5-213ENST00000486039 PAGE2BQ5JRK9 111 aa18.37■□□□□ 0.53
SNX5-213ENST00000486039 PAPD4Q6PIY7 484 aaKnown RBP18.37■□□□□ 0.53
SNX5-213ENST00000486039 QSOX2Q6ZRP7 698 aa18.37■□□□□ 0.53
SNX5-213ENST00000486039 IFT20Q8IY31 132 aa18.37■□□□□ 0.53
SNX5-213ENST00000486039 LRRN4CLQ8ND94 238 aa18.37■□□□□ 0.53
SNX5-213ENST00000486039 OR2L5Q8NG80 312 aa18.37■□□□□ 0.53
SNX5-213ENST00000486039 FAR2Q96K12 515 aa18.37■□□□□ 0.53
SNX5-213ENST00000486039 PTCHD1Q96NR3 888 aa18.37■□□□□ 0.53
SNX5-213ENST00000486039 QRFPRQ96P65 431 aa18.37■□□□□ 0.53
SNX5-213ENST00000486039 RHOXF2Q9BQY4 288 aa18.37■□□□□ 0.53
SNX5-213ENST00000486039 SLC29A3Q9BZD2 475 aa18.37■□□□□ 0.53
SNX5-213ENST00000486039 ZNF180Q9UJW8 692 aa18.37■□□□□ 0.53
SNX5-213ENST00000486039 A0A087WUV0 522 aaPredicted RBP18.36■□□□□ 0.53
SNX5-213ENST00000486039 LRRC14BA6NHZ5 514 aa18.36■□□□□ 0.53
SNX5-213ENST00000486039 PRMT3O60678 531 aa18.36■□□□□ 0.53
SNX5-213ENST00000486039 GFAPP14136 432 aa18.36■□□□□ 0.53
SNX5-213ENST00000486039 MSH2P43246 934 aa18.36■□□□□ 0.53
SNX5-213ENST00000486039 PLA2G16P53816 162 aa18.36■□□□□ 0.53
SNX5-213ENST00000486039 OR4D2P58180 307 aa18.36■□□□□ 0.53
SNX5-213ENST00000486039 ARG2P78540 354 aa18.36■□□□□ 0.53
SNX5-213ENST00000486039 ACTN3Q08043 901 aaPredicted RBP18.36■□□□□ 0.53
SNX5-213ENST00000486039 NAA30Q147X3 362 aaPredicted RBP18.36■□□□□ 0.53
SNX5-213ENST00000486039 TLR1Q15399 786 aa18.36■□□□□ 0.53
SNX5-213ENST00000486039 HIST2H2ACQ16777 129 aaPredicted RBP18.36■□□□□ 0.53
SNX5-213ENST00000486039 TECRLQ5HYJ1 363 aa18.36■□□□□ 0.53
SNX5-213ENST00000486039 HIST2H2AA3Q6FI13 130 aa18.36■□□□□ 0.53
SNX5-213ENST00000486039 KLC3Q6P597 504 aa18.36■□□□□ 0.53
SNX5-213ENST00000486039 ABHD17CQ6PCB6 329 aa18.36■□□□□ 0.53
SNX5-213ENST00000486039 LAS2Q8IYD9 372 aa18.36■□□□□ 0.53
SNX5-213ENST00000486039 TEX9Q8N6V9 391 aa18.36■□□□□ 0.53
SNX5-213ENST00000486039 ZNF473Q8WTR7 871 aaKnown RBP18.36■□□□□ 0.53
SNX5-213ENST00000486039 HAS2Q92819 552 aa18.36■□□□□ 0.53
SNX5-213ENST00000486039 LPAR4Q99677 370 aa18.36■□□□□ 0.53
SNX5-213ENST00000486039 BARD1Q99728 777 aaKnown RBP18.36■□□□□ 0.53
SNX5-213ENST00000486039 NPLQ9BXD5 320 aaPredicted RBP18.36■□□□□ 0.53
SNX5-213ENST00000486039 COPG1Q9Y678 874 aaKnown RBP18.36■□□□□ 0.53
SNX5-213ENST00000486039 IKBKGQ9Y6K9 419 aa18.36■□□□□ 0.53
SNX5-213ENST00000486039 IGKV3D-11A0A0A0MRZ8 115 aa18.35■□□□□ 0.53
SNX5-213ENST00000486039 PSMD12O00232 456 aaPredicted RBP18.35■□□□□ 0.53
SNX5-213ENST00000486039 WDPCPO95876 746 aa18.35■□□□□ 0.53
SNX5-213ENST00000486039 F10P00742 488 aa18.35■□□□□ 0.53
SNX5-213ENST00000486039 EPB42P16452 691 aa18.35■□□□□ 0.53
SNX5-213ENST00000486039 MAOAP21397 527 aa18.35■□□□□ 0.53
SNX5-213ENST00000486039 TSFMP43897 325 aaKnown RBP18.35■□□□□ 0.53
SNX5-213ENST00000486039 ALDH18A1P54886 795 aaKnown RBP18.35■□□□□ 0.53
SNX5-213ENST00000486039 EXT1Q16394 746 aa18.35■□□□□ 0.53
SNX5-213ENST00000486039 H3F3CQ6NXT2 135 aa18.35■□□□□ 0.53
SNX5-213ENST00000486039 TRIM40Q6P9F5 258 aa18.35■□□□□ 0.53
SNX5-213ENST00000486039 M1APQ8TC57 530 aa18.35■□□□□ 0.53
SNX5-213ENST00000486039 F2RL3Q96RI0 385 aa18.35■□□□□ 0.53
SNX5-213ENST00000486039 MMP25Q9NPA2 562 aa18.35■□□□□ 0.53
SNX5-213ENST00000486039 NECTIN3Q9NQS3 549 aa18.35■□□□□ 0.53
SNX5-213ENST00000486039 PRDM9Q9NQV7 894 aa18.35■□□□□ 0.53
SNX5-213ENST00000486039 PRDM7Q9NQW5 492 aa18.35■□□□□ 0.53
SNX5-213ENST00000486039 RP1L1Q8IWN7 2480 aaPredicted RBP18.34■□□□□ 0.53
SNX5-213ENST00000486039 UTP20O75691 2785 aaKnown RBP18.34■□□□□ 0.53
SNX5-213ENST00000486039 TCRBV16S1A1N1A0A5B0 115 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 DYTNA2CJ06 578 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 A8MUI8 341 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 TRIM49D1C9J1S8 452 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 B3GALT2O43825 422 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 SEMA7AO75326 666 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 KRT38O76015 456 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 UQCRHP07919 91 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 ABHD2P08910 425 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 FAM153BP0C7A2 387 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 CNTFP26441 200 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 CERS1P27544 350 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 GCAP28676 217 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 HPDP32754 393 aaPredicted RBP18.34■□□□□ 0.53
SNX5-213ENST00000486039 TNFSF10P50591 281 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 RAB38P57729 211 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 SLC26A5P58743 744 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 MRPL49Q13405 166 aaKnown RBP18.34■□□□□ 0.53
SNX5-213ENST00000486039 PCBP2Q15366 365 aaKnown RBP eCLIP18.34■□□□□ 0.53
SNX5-213ENST00000486039 EIF2S3LQ2VIR3 472 aaKnown RBP18.34■□□□□ 0.53
SNX5-213ENST00000486039 FAM153CQ494X1 144 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 GRHL2Q6ISB3 625 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 MED27Q6P2C8 311 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 TAOK1Q7L7X3 1001 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms