RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 MRGPREQ86SM8 312 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 WDR20Q8TBZ3 569 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 ADAMTS17Q8TE56 1095 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 EXTL1Q92935 676 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 SMIM10Q96HG1 83 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 PKNOX2Q96KN3 472 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 CATSPER2Q96P56 530 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 CENPKQ9BS16 269 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 GATA5Q9BWX5 397 aaPredicted RBP11.2□□□□□ -0.62
HPS4-214ENST00000485842 SHCBP1LQ9BZQ2 653 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 ELOVL6Q9H5J4 265 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 MID1IP1Q9NPA3 183 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 ZNF225Q9UK10 706 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 MKL2Q9ULH7 1088 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 TSC22D4Q9Y3Q8 395 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 SCN2AQ99250 2005 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 ARGFXA6NJG6 315 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 PSMD12O00232 456 aaPredicted RBP11.19□□□□□ -0.62
HPS4-214ENST00000485842 B3GALT2O43825 422 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 TRIM13O60858 407 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 CDC123O75794 336 aaPredicted RBP11.19□□□□□ -0.62
HPS4-214ENST00000485842 BMP10O95393 424 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 ETHE1O95571 254 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 RECKO95980 971 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 HEXBP07686 556 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 RNH1P13489 461 aaKnown RBP11.19□□□□□ -0.62
HPS4-214ENST00000485842 EMP2P54851 167 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 MTTPP55157 894 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 MAGOHP61326 146 aaKnown RBP11.19□□□□□ -0.62
HPS4-214ENST00000485842 NAA20P61599 178 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 RHDQ02161 417 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 ASPHQ12797 758 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 CHAF1BQ13112 559 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 TBR1Q16650 682 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 AP5B1Q2VPB7 878 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 TMEM35AQ53FP2 167 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 TNFAIP8L3Q5GJ75 292 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 DEPDC1Q5TB30 811 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 CPZQ66K79 652 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 ZNF793Q6ZN11 406 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 ZCCHC23Q6ZST2 131 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 HDXQ7Z353 690 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 PPP1R32Q7Z5V6 425 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 UBE3DQ7Z6J8 389 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 LAPTM4BQ86VI4 370 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 CA13Q8N1Q1 262 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 ANKRD42Q8N9B4 389 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 SRFBP1Q8NEF9 429 aaKnown RBP11.19□□□□□ -0.62
HPS4-214ENST00000485842 METTL6Q8TCB7 284 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 AGAP11Q8TF27 550 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 SELENOMQ8WWX9 145 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 SREK1Q8WXA9 508 aaKnown RBP11.19□□□□□ -0.62
HPS4-214ENST00000485842 QRFPRQ96P65 431 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 KCNC2Q96PR1 638 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 KCNA7Q96RP8 456 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 HBEGFQ99075 208 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 ARHGAP9Q9BRR9 750 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 TBCDQ9BTW9 1192 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 SORBS1Q9BX66 1292 aaKnown RBP11.19□□□□□ -0.62
HPS4-214ENST00000485842 SLC29A3Q9BZD2 475 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 TGIF2Q9GZN2 237 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 TMBIM4Q9HC24 238 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 SSU72Q9NP77 194 aaKnown RBP11.19□□□□□ -0.62
HPS4-214ENST00000485842 SEMA3GQ9NS98 782 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 FARSBQ9NSD9 589 aaKnown RBP11.19□□□□□ -0.62
HPS4-214ENST00000485842 SNX6Q9UNH7 406 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 ACTL7BQ9Y614 415 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 ZFHX4Q86UP3 3567 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 PCSK5Q92824 1860 aa11.19□□□□□ -0.62
HPS4-214ENST00000485842 ITPR1Q14643 2758 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 WDR91A4D1P6 747 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 OR2W5A6NFC9 320 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 MANBAO00462 879 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 PEX12O00623 359 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 UBFD1O14562 309 aaKnown RBP11.18□□□□□ -0.62
HPS4-214ENST00000485842 B4GALT2O60909 372 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 ALOX12BO75342 701 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 CRCPO75575 148 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 ESRRBO95718 433 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 PDYNP01213 254 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 IGHEP01854 428 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 KRT6AP02538 564 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 KRT6BP04259 564 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 ENO1P06733 434 aaKnown RBP11.18□□□□□ -0.62
HPS4-214ENST00000485842 FHP07954 510 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 MMP11P24347 488 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 PTX3P26022 381 aaPredicted RBP11.18□□□□□ -0.62
HPS4-214ENST00000485842 ETV4P43268 484 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 SERPINB4P48594 390 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 KRT6CP48668 564 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 HTR6P50406 440 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 EEF1A2Q05639 463 aaKnown RBP11.18□□□□□ -0.62
HPS4-214ENST00000485842 RUNX2Q13950 521 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 BORAQ6PGQ7 559 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 PPP1R14CQ8TAE6 165 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 APOBEC4Q8WW27 367 aaKnown RBP11.18□□□□□ -0.62
HPS4-214ENST00000485842 THAP4Q8WY91 577 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 RGMAQ96B86 450 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 TBC1D20Q96BZ9 403 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 C8orf44Q96CB5 159 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms