RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 AICDAQ9GZX7 198 aa16.05■□□□□ 0.16
SMC4-216ENST00000485645 RHOJQ9H4E5 214 aa16.05■□□□□ 0.16
SMC4-216ENST00000485645 POPDC3Q9HBV1 291 aa16.05■□□□□ 0.16
SMC4-216ENST00000485645 CHST11Q9NPF2 352 aa16.05■□□□□ 0.16
SMC4-216ENST00000485645 TINAGQ9UJW2 476 aa16.05■□□□□ 0.16
SMC4-216ENST00000485645 ZNF835Q9Y2P0 537 aa16.05■□□□□ 0.16
SMC4-216ENST00000485645 ABCA12Q86UK0 2595 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 NCF1BA6NI72 391 aaPredicted RBP16.04■□□□□ 0.16
SMC4-216ENST00000485645 NCF1CA8MVU1 366 aaPredicted RBP16.04■□□□□ 0.16
SMC4-216ENST00000485645 FCHO1O14526 889 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 ASNA1O43681 348 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 NME2P1O60361 137 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 NCF1P14598 390 aaPredicted RBP16.04■□□□□ 0.16
SMC4-216ENST00000485645 NME2P22392 152 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 HTR1EP28566 365 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 SLC6A12P48065 614 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 ZNF630Q2M218 657 aaPredicted RBP16.04■□□□□ 0.16
SMC4-216ENST00000485645 C18orf21Q32NC0 220 aaPredicted RBP16.04■□□□□ 0.16
SMC4-216ENST00000485645 TMIGD1Q6UXZ0 262 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 Q6ZPB1 254 aaPredicted RBP16.04■□□□□ 0.16
SMC4-216ENST00000485645 SLCO4C1Q6ZQN7 724 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 SIAH3Q8IW03 269 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.04■□□□□ 0.16
SMC4-216ENST00000485645 KLHDC8AQ8IYD2 350 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 ZBED8Q8IZ13 594 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 KRT78Q8N1N4 520 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 CCT6BQ92526 530 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 GAL3ST3Q96A11 431 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 CAPS2Q9BXY5 557 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 TRIM45Q9H8W5 580 aaPredicted RBP16.04■□□□□ 0.16
SMC4-216ENST00000485645 SNX24Q9Y343 169 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 MMACHCQ9Y4U1 282 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.04■□□□□ 0.16
SMC4-216ENST00000485645 GTF3C1Q12789 2109 aa16.04■□□□□ 0.16
SMC4-216ENST00000485645 CSMD1Q96PZ7 3565 aa16.03■□□□□ 0.16
SMC4-216ENST00000485645 ZNF24P17028 368 aa16.03■□□□□ 0.16
SMC4-216ENST00000485645 GSTM2P28161 218 aa16.03■□□□□ 0.16
SMC4-216ENST00000485645 TRHRP34981 398 aaPredicted RBP16.03■□□□□ 0.16
SMC4-216ENST00000485645 RPL21P46778 160 aaKnown RBP16.03■□□□□ 0.16
SMC4-216ENST00000485645 HLCSP50747 726 aa16.03■□□□□ 0.16
SMC4-216ENST00000485645 CLCN2P51788 898 aa16.03■□□□□ 0.16
SMC4-216ENST00000485645 SMSP52788 366 aa16.03■□□□□ 0.16
SMC4-216ENST00000485645 ADORA2A-AS1P86434 159 aa16.03■□□□□ 0.16
SMC4-216ENST00000485645 POU4F1Q01851 419 aa16.03■□□□□ 0.16
SMC4-216ENST00000485645 SLBPQ14493 270 aaKnown RBP eCLIP16.03■□□□□ 0.16
SMC4-216ENST00000485645 TGFBIQ15582 683 aa16.03■□□□□ 0.16
SMC4-216ENST00000485645 GHDCQ8N2G8 530 aa16.03■□□□□ 0.16
SMC4-216ENST00000485645 B3GNT7Q8NFL0 401 aa16.03■□□□□ 0.16
SMC4-216ENST00000485645 MCMBPQ9BTE3 642 aa16.03■□□□□ 0.16
SMC4-216ENST00000485645 NPLQ9BXD5 320 aaPredicted RBP16.03■□□□□ 0.16
SMC4-216ENST00000485645 DERL2Q9GZP9 239 aa16.03■□□□□ 0.16
SMC4-216ENST00000485645 MTO1Q9Y2Z2 717 aaKnown RBP16.03■□□□□ 0.16
SMC4-216ENST00000485645 A0A088AWK7 358 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 A0A0G2JN53 185 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 LRIT2A6NDA9 550 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 ANKDD1BA6NHY2 528 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 ERI3O43414 337 aaKnown RBP16.02■□□□□ 0.16
SMC4-216ENST00000485645 MYO1DO94832 1006 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 ABOP16442 354 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 AGAP20933 346 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 ZNF10P21506 573 aaPredicted RBP16.02■□□□□ 0.16
SMC4-216ENST00000485645 HPDP32754 393 aaPredicted RBP16.02■□□□□ 0.16
SMC4-216ENST00000485645 CBLBQ13191 982 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 RUNX2Q13950 521 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 TERF2Q15554 542 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 CAPN12Q6ZSI9 719 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 ZNF227Q86WZ6 799 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 ARMC10Q8N2F6 343 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 TCAIMQ8N3R3 496 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 CPSF7Q8N684 471 aaKnown RBP16.02■□□□□ 0.16
SMC4-216ENST00000485645 APCDD1LQ8NCL9 501 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 BBOF1Q8ND07 529 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 ADAMTS18Q8TE60 1221 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 PYROXD1Q8WU10 500 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 CDKL2Q92772 493 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 MS4A6EQ96DS6 147 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 TSPAN17Q96FV3 270 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 SEC16BQ96JE7 1060 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 KRT12Q99456 494 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 PITHD1Q9GZP4 211 aaPredicted RBP16.02■□□□□ 0.16
SMC4-216ENST00000485645 NT5DC2Q9H857 520 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 CNOT10Q9H9A5 744 aaKnown RBP16.02■□□□□ 0.16
SMC4-216ENST00000485645 PRTFDC1Q9NRG1 225 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 SMYD2Q9NRG4 433 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 PNO1Q9NRX1 252 aaKnown RBP16.02■□□□□ 0.16
SMC4-216ENST00000485645 WWOXQ9NZC7 414 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 GPRC5BQ9NZH0 403 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 TXNDC16Q9P2K2 825 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 RNF14Q9UBS8 474 aa16.02■□□□□ 0.16
SMC4-216ENST00000485645 PKDREJQ9NTG1 2253 aa16.02■□□□□ 0.15
SMC4-216ENST00000485645 NCOA6Q14686 2063 aaPredicted RBP16.01■□□□□ 0.15
SMC4-216ENST00000485645 TRBV11-1A0A0K0K1C0 115 aa16.01■□□□□ 0.15
SMC4-216ENST00000485645 CLDN4O14493 209 aa16.01■□□□□ 0.15
SMC4-216ENST00000485645 CLGNO14967 610 aa16.01■□□□□ 0.15
SMC4-216ENST00000485645 B3GALT2O43825 422 aa16.01■□□□□ 0.15
SMC4-216ENST00000485645 CLEC3AO75596 197 aa16.01■□□□□ 0.15
SMC4-216ENST00000485645 PIAS1O75925 651 aa16.01■□□□□ 0.15
SMC4-216ENST00000485645 HNRNPH1P31943 449 aaKnown RBP16.01■□□□□ 0.15
SMC4-216ENST00000485645 PTGER4P35408 488 aa16.01■□□□□ 0.15
SMC4-216ENST00000485645 HSD17B7P56937 341 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms