RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 KLHL18O94889 574 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 TNFSF15O95150 251 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 NSA2O95478 260 aaKnown RBP16.67■□□□□ 0.26
CHMP3-207ENST00000485465 NTRK1P04629 796 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 KLK1P06870 262 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 LBPP18428 481 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 ZNF10P21506 573 aaPredicted RBP16.67■□□□□ 0.26
CHMP3-207ENST00000485465 HIST1H1TP22492 207 aaPredicted RBP16.67■□□□□ 0.26
CHMP3-207ENST00000485465 ALAS2P22557 587 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 ATP5A1P25705 553 aaKnown RBP16.67■□□□□ 0.26
CHMP3-207ENST00000485465 ID4P47928 161 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 ARFIP2P53365 341 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 MTTPP55157 894 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 RPL38P63173 70 aaKnown RBP16.67■□□□□ 0.26
CHMP3-207ENST00000485465 GABREP78334 506 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 RAE1P78406 368 aaKnown RBP16.67■□□□□ 0.26
CHMP3-207ENST00000485465 EMX2Q04743 252 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 LSM12Q3MHD2 195 aaKnown RBP16.67■□□□□ 0.26
CHMP3-207ENST00000485465 TMEM164Q5U3C3 297 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 NIPAL1Q6NVV3 410 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 GALNT18Q6P9A2 607 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 PAGE2Q7Z2X7 111 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 SPATA21Q7Z572 469 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 NUDT13Q86X67 352 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 DTWD1Q8N5C7 304 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 AMER3Q8N944 861 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 FNDC5Q8NAU1 212 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 SLC38A9Q8NBW4 561 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 OR9A4Q8NGU2 314 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 CEP70Q8NHQ1 597 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 CLIP3Q96DZ5 547 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 RNF31Q96EP0 1072 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 MVB12AQ96EY5 273 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 FCRL1Q96LA6 429 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 SERINC2Q96SA4 455 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 CCT8L2Q96SF2 557 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 CCDC28BQ9BUN5 200 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 B3GNT4Q9C0J1 378 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 DDX31Q9H8H2 851 aaKnown RBP16.67■□□□□ 0.26
CHMP3-207ENST00000485465 COPS7BQ9H9Q2 264 aaPredicted RBP16.67■□□□□ 0.26
CHMP3-207ENST00000485465 TCF7L2Q9NQB0 619 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 TXLNGQ9NUQ3 528 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 NDOR1Q9UHB4 597 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 TMED5Q9Y3A6 229 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 PTPRBP23467 1997 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 A0A1B0GX78 115 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 SGK494L7N484 410 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 SNX3O60493 162 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 CPNE3O75131 537 aaKnown RBP16.66■□□□□ 0.26
CHMP3-207ENST00000485465 MYO1DO94832 1006 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 KIAA0754O94854 1291 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 SCELO95171 688 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 ZNF28P17035 718 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 TPP2P29144 1249 aaPredicted RBP16.66■□□□□ 0.26
CHMP3-207ENST00000485465 TIA1P31483 386 aaKnown RBP eCLIP16.66■□□□□ 0.26
CHMP3-207ENST00000485465 AVPR1BP47901 424 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 ERVK-8P63133 956 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 SKP1P63208 163 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 FOXC1Q12948 553 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 C1orf189Q5VU69 101 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 OGFOD2Q6N063 350 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 NOXRED1Q6NXP6 359 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 ZCCHC7Q8N3Z6 543 aaKnown RBP16.66■□□□□ 0.26
CHMP3-207ENST00000485465 ACOT4Q8N9L9 421 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 C10orf82Q8WW14 230 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 ULBP3Q9BZM4 244 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 MCM8Q9UJA3 840 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 CDC14AQ9UNH5 594 aa16.66■□□□□ 0.26
CHMP3-207ENST00000485465 POLR3HQ9Y535 204 aaPredicted RBP16.66■□□□□ 0.26
CHMP3-207ENST00000485465 A0A0A6YYD5 115 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 ARHGAP10A1A4S6 786 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 H0YIG0 161 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 B3GALT2O43825 422 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 PCDH7O60245 1069 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 FAM107AO95990 144 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 GBAP04062 536 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 CERS1P27544 350 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 MAD2L1Q13257 205 aaPredicted RBP16.65■□□□□ 0.26
CHMP3-207ENST00000485465 CAMK2BQ13554 666 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 CCNYL2Q5T2Q4 361 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 PRMT9Q6P2P2 845 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 CYP20A1Q6UW02 462 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 SPATA19Q7Z5L4 167 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 PIGWQ7Z7B1 504 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 PARP9Q8IXQ6 854 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 METTL27Q8N6F8 245 aaPredicted RBP16.65■□□□□ 0.26
CHMP3-207ENST00000485465 PROKR1Q8TCW9 393 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 MMABQ96EY8 250 aaPredicted RBP16.65■□□□□ 0.26
CHMP3-207ENST00000485465 RILPQ96NA2 401 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 SLC46A1Q96NT5 459 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 GBP5Q96PP8 586 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 C1orf50Q9BV19 199 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 NPLQ9BXD5 320 aaPredicted RBP16.65■□□□□ 0.26
CHMP3-207ENST00000485465 EBPLQ9BY08 206 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 NRSN2Q9GZP1 204 aa16.65■□□□□ 0.26
CHMP3-207ENST00000485465 CLK4Q9HAZ1 481 aaKnown RBP16.65■□□□□ 0.26
CHMP3-207ENST00000485465 EIF3LQ9Y262 564 aaKnown RBP16.65■□□□□ 0.26
CHMP3-207ENST00000485465 KIF26BQ2KJY2 2108 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 ZNF860A6NHJ4 632 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 NVLO15381 856 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms