RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 ZNF195O14628 629 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 TLX2O43763 284 aaPredicted RBP4.42□□□□□ -1.7
SRRM1-213ENST00000485441 PRDM1O75626 825 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 CEACAM4O75871 244 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 B4GALT1P15291 398 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 ZNF26P17031 533 aaPredicted RBP4.42□□□□□ -1.7
SRRM1-213ENST00000485441 UGT1A6P19224 532 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 AHCYP23526 432 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 TNFSF10P50591 281 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 CCR4P51679 360 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 CNN1P51911 297 aaKnown RBP4.42□□□□□ -1.7
SRRM1-213ENST00000485441 PAX9P55771 341 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 BTG1P62324 171 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 GUCY2DQ02846 1103 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 MFGE8Q08431 387 aaPredicted RBP4.42□□□□□ -1.7
SRRM1-213ENST00000485441 MTF1Q14872 753 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 SPHARQ15513 63 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 STX1AQ16623 288 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 ZNF876PQ49A33 203 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 FGD3Q5JSP0 725 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 SPANXN4Q5MJ08 99 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 ETFRF1Q6IPR1 90 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 B3GLCTQ6Y288 498 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 STHQ8IWL8 128 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 CCDC185Q8N715 623 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 DDHD1Q8NEL9 900 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 ARHGAP45Q92619 1136 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 TMEM186Q96B77 213 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 ULK4Q96C45 1275 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 ZNF486Q96H40 463 aaPredicted RBP4.42□□□□□ -1.7
SRRM1-213ENST00000485441 LRR1Q96L50 414 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 NAP1L3Q99457 506 aaPredicted RBP4.42□□□□□ -1.7
SRRM1-213ENST00000485441 ZNF577Q9BSK1 485 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 LRRC2Q9BYS8 371 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 CARD9Q9H257 536 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 DPEP3Q9H4B8 488 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 ZCCHC3Q9NUD5 404 aaKnown RBP4.42□□□□□ -1.7
SRRM1-213ENST00000485441 ATAD3AQ9NVI7 634 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 UBQLN2Q9UHD9 624 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 ETV7Q9Y603 341 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 UMODL1Q5DID0 1318 aa4.42□□□□□ -1.7
SRRM1-213ENST00000485441 TCF20Q9UGU0 1960 aaKnown RBP4.42□□□□□ -1.7
SRRM1-213ENST00000485441 MEIOCA2RUB1 952 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 C19orf81C9J6K1 198 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 SLC28A1O00337 649 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 LRCH4O75427 683 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 CHRNGP07510 517 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 PRKAR1AP10644 381 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 SKILP12757 684 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 GFPT1Q06210 699 aaPredicted RBP4.41□□□□□ -1.7
SRRM1-213ENST00000485441 CNTN1Q12860 1018 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 LCP2Q13094 533 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 TSTA3Q13630 321 aaPredicted RBP4.41□□□□□ -1.7
SRRM1-213ENST00000485441 GIT2Q14161 759 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 ATP1A1-AS1Q5TC04 95 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 BHLHB9Q6PI77 547 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 MACC1Q6ZN28 852 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 TOM1L2Q6ZVM7 507 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 SLC22A15Q8IZD6 547 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 TRPV3Q8NET8 790 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 OR4D10Q8NGI6 311 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 SPATA18Q8TC71 538 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 MAPK15Q8TD08 544 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 UBTD2Q8WUN7 234 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 SLC13A3Q8WWT9 602 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 SMPDL3AQ92484 453 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 RUFY1Q96T51 708 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 PCDHB18PQ96TA0 734 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 SSX3Q99909 188 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 FAM213AQ9BRX8 229 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 FSD1Q9BTV5 496 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 NYXQ9GZU5 481 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 ZNF696Q9H7X3 374 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 VIPAS39Q9H9C1 493 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 PIGVQ9NUD9 493 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 NINJ2Q9NZG7 142 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 TSPAN16Q9UKR8 245 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 ERVK-19Q9WJR5 959 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 SH3GLB1Q9Y371 365 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 STRAPQ9Y3F4 350 aaKnown RBP4.41□□□□□ -1.7
SRRM1-213ENST00000485441 SELENOKQ9Y6D0 94 aa4.41□□□□□ -1.7
SRRM1-213ENST00000485441 SYCE3A1L190 88 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 NR5A2O00482 541 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 CHUKO15111 745 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 ALPPP05187 535 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 ALPPL2P10696 532 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 GAP43P17677 238 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 FCARP24071 287 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 ACKR3P25106 362 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 HLA-FP30511 346 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 FEN1P39748 380 aaKnown RBP4.4□□□□□ -1.71
SRRM1-213ENST00000485441 LUMP51884 338 aaPredicted RBP4.4□□□□□ -1.71
SRRM1-213ENST00000485441 HUNKP57058 714 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 PDK1Q15118 436 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 NEK5Q6P3R8 708 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 FIP1L1Q6UN15 594 aaKnown RBP4.4□□□□□ -1.71
SRRM1-213ENST00000485441 DLEU7Q6UYE1 221 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 Q6ZSR9 355 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 ADAMTSL2Q86TH1 951 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 CATSPERDQ86XM0 798 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms