RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 CNPPD1Q9BV87 410 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 POLDIP3Q9BY77 421 aaKnown RBP11.98□□□□□ -0.49
UBR4-213ENST00000483922 PCBD2Q9H0N5 130 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 PRDM9Q9NQV7 894 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 RASSF1Q9NS23 344 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 PPIEQ9UNP9 301 aaKnown RBP11.98□□□□□ -0.49
UBR4-213ENST00000483922 A0A1B0GVC2 190 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 MYO1DO94832 1006 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 OR6B1O95007 311 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 IGHG3P01860 377 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 SERPIND1P05546 499 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 ACVR2AP27037 513 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 GABRB3P28472 473 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 SCTRP47872 440 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 ZFP36L2P47974 494 aaKnown RBP11.97□□□□□ -0.49
UBR4-213ENST00000483922 RUNX2Q13950 521 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 DHX34Q14147 1143 aaKnown RBP11.97□□□□□ -0.49
UBR4-213ENST00000483922 UGT3A1Q6NUS8 523 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 ZNF585AQ6P3V2 769 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 PAQR3Q6TCH7 311 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 SEM1Q6ZVN7 128 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 KIAA1328Q86T90 577 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 CLYBLQ8N0X4 340 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 CA13Q8N1Q1 262 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 TMEM156Q8N614 296 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 PSD4Q8NDX1 1056 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 CHDHQ8NE62 594 aaPredicted RBP11.97□□□□□ -0.49
UBR4-213ENST00000483922 OR5M3Q8NGP4 307 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 OR10Q1Q8NGQ4 319 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 OR56A3Q8NH54 315 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 CREB3L4Q8TEY5 395 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 SNF8Q96H20 258 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 PDLIM2Q96JY6 352 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 PWWP2AQ96N64 755 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 AARSD1Q9BTE6 412 aaKnown RBP11.97□□□□□ -0.49
UBR4-213ENST00000483922 TTTY12Q9BZ98 90 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 FAM129AQ9BZQ8 928 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 SLC6A16Q9GZN6 736 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 RHBGQ9H310 441 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 PARVBQ9HBI1 364 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 SEMA4BQ9NPR2 832 aaPredicted RBP11.97□□□□□ -0.49
UBR4-213ENST00000483922 TRMT1Q9NXH9 659 aaKnown RBP11.97□□□□□ -0.49
UBR4-213ENST00000483922 CRIM1Q9NZV1 1036 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 FBXW2Q9UKT8 454 aa11.97□□□□□ -0.49
UBR4-213ENST00000483922 DNAJC13O75165 2243 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 MYOCOSA0A1B0GUC4 107 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 TRBC2A0A5B9 178 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 CTAGE9A4FU28 777 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 AP3B1O00203 1094 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 FCHO1O14526 889 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 PFDN6O15212 129 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 OR2J2O76002 312 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 JAK1P23458 1154 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 MAGEA6P43360 314 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 CCR8P51685 355 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 CLCN2P51788 898 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 LTBQ06643 244 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 DHX9Q08211 1270 aaKnown RBP11.96□□□□□ -0.49
UBR4-213ENST00000483922 FOXO1Q12778 655 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 KIF5AQ12840 1032 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 TRIP13Q15645 432 aaPredicted RBP11.96□□□□□ -0.49
UBR4-213ENST00000483922 SEL1L2Q5TEA6 688 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 IL20RBQ6UXL0 311 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 TRILQ7L0X0 811 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 STRA8Q7Z7C7 330 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 CDC20BQ86Y33 519 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 KRTAP1-3Q8IUG1 177 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 TMEM251Q8N6I4 163 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 ZNF321PQ8N8H1 164 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 WFDC11Q8NEX6 87 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 SLCO2A1Q92959 643 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 NEIL2Q969S2 332 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 NCLNQ969V3 563 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 ZNF669Q96BR6 464 aaPredicted RBP11.96□□□□□ -0.49
UBR4-213ENST00000483922 NDNQ99608 321 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 ZFP69BQ9UJL9 534 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 IKZF3Q9UKT9 509 aa11.96□□□□□ -0.49
UBR4-213ENST00000483922 EML6Q6ZMW3 1958 aa11.96□□□□□ -0.5
UBR4-213ENST00000483922 FBN1P35555 2871 aaKnown RBP11.95□□□□□ -0.5
UBR4-213ENST00000483922 KDM4EB2RXH2 506 aaPredicted RBP11.95□□□□□ -0.5
UBR4-213ENST00000483922 EIF3FO00303 357 aaPredicted RBP11.95□□□□□ -0.5
UBR4-213ENST00000483922 TBX6O95947 436 aaPredicted RBP11.95□□□□□ -0.5
UBR4-213ENST00000483922 TUBB4AP04350 444 aa11.95□□□□□ -0.5
UBR4-213ENST00000483922 FOSL1P15407 271 aa11.95□□□□□ -0.5
UBR4-213ENST00000483922 ENDOUP21128 410 aaKnown RBP11.95□□□□□ -0.5
UBR4-213ENST00000483922 GRK3P35626 688 aa11.95□□□□□ -0.5
UBR4-213ENST00000483922 MAGEA5P43359 124 aa11.95□□□□□ -0.5
UBR4-213ENST00000483922 ZNF75DP51815 510 aa11.95□□□□□ -0.5
UBR4-213ENST00000483922 CDKN2DP55273 166 aa11.95□□□□□ -0.5
UBR4-213ENST00000483922 PPP2R2AP63151 447 aa11.95□□□□□ -0.5
UBR4-213ENST00000483922 CDK16Q00536 496 aa11.95□□□□□ -0.5
UBR4-213ENST00000483922 POMZP3Q6PJE2 187 aa11.95□□□□□ -0.5
UBR4-213ENST00000483922 SCUBE1Q8IWY4 988 aa11.95□□□□□ -0.5
UBR4-213ENST00000483922 RASL10BQ96S79 203 aa11.95□□□□□ -0.5
UBR4-213ENST00000483922 SMC6Q96SB8 1091 aa11.95□□□□□ -0.5
UBR4-213ENST00000483922 MDFIQ99750 246 aa11.95□□□□□ -0.5
UBR4-213ENST00000483922 TSGA10Q9BZW7 698 aa11.95□□□□□ -0.5
UBR4-213ENST00000483922 CLEC4MQ9H2X3 399 aaPredicted RBP11.95□□□□□ -0.5
UBR4-213ENST00000483922 TIMMDC1Q9NPL8 285 aa11.95□□□□□ -0.5
UBR4-213ENST00000483922 PNO1Q9NRX1 252 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms