RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 CHEK2O96017 543 aa16.89■□□□□ 0.3
CPNE1-224ENST00000483359 GBAP04062 536 aa16.89■□□□□ 0.3
CPNE1-224ENST00000483359 CAPNS1P04632 268 aa16.89■□□□□ 0.3
CPNE1-224ENST00000483359 SMIM10L1P0DMW3 83 aa16.89■□□□□ 0.3
CPNE1-224ENST00000483359 IMPG1Q17R60 797 aa16.89■□□□□ 0.3
CPNE1-224ENST00000483359 TMEM35AQ53FP2 167 aa16.89■□□□□ 0.3
CPNE1-224ENST00000483359 C10orf62Q5T681 223 aaPredicted RBP16.89■□□□□ 0.3
CPNE1-224ENST00000483359 ZNF793Q6ZN11 406 aa16.89■□□□□ 0.3
CPNE1-224ENST00000483359 SHISA6Q6ZSJ9 500 aa16.89■□□□□ 0.3
CPNE1-224ENST00000483359 PRSS58Q8IYP2 241 aa16.89■□□□□ 0.3
CPNE1-224ENST00000483359 ARFGAP2Q8N6H7 521 aa16.89■□□□□ 0.3
CPNE1-224ENST00000483359 SMIM10Q96HG1 83 aa16.89■□□□□ 0.3
CPNE1-224ENST00000483359 PPP1R36Q96LQ0 422 aa16.89■□□□□ 0.3
CPNE1-224ENST00000483359 DPH2Q9BQC3 489 aaPredicted RBP16.89■□□□□ 0.3
CPNE1-224ENST00000483359 ILKAPQ9H0C8 392 aaPredicted RBP16.89■□□□□ 0.3
CPNE1-224ENST00000483359 THAP1Q9NVV9 213 aa16.89■□□□□ 0.3
CPNE1-224ENST00000483359 SEC16AO15027 2179 aa16.89■□□□□ 0.29
CPNE1-224ENST00000483359 C9J4A7 227 aa16.89■□□□□ 0.29
CPNE1-224ENST00000483359 H0YIG0 161 aa16.89■□□□□ 0.29
CPNE1-224ENST00000483359 PIP5K1BO14986 540 aa16.89■□□□□ 0.29
CPNE1-224ENST00000483359 SNNO75324 88 aaPredicted RBP16.89■□□□□ 0.29
CPNE1-224ENST00000483359 LINC00032P0C843 101 aa16.89■□□□□ 0.29
CPNE1-224ENST00000483359 KITP10721 976 aa16.89■□□□□ 0.29
CPNE1-224ENST00000483359 F8A1P23610 371 aa16.89■□□□□ 0.29
CPNE1-224ENST00000483359 RPS18P62269 152 aaKnown RBP16.89■□□□□ 0.29
CPNE1-224ENST00000483359 BTKQ06187 659 aa16.89■□□□□ 0.29
CPNE1-224ENST00000483359 TGM3Q08188 693 aa16.89■□□□□ 0.29
CPNE1-224ENST00000483359 CSTF3Q12996 717 aaKnown RBP16.89■□□□□ 0.29
CPNE1-224ENST00000483359 CUL3Q13618 768 aa16.89■□□□□ 0.29
CPNE1-224ENST00000483359 DSG2Q14126 1118 aa16.89■□□□□ 0.29
CPNE1-224ENST00000483359 PDCD2Q16342 344 aaPredicted RBP16.89■□□□□ 0.29
CPNE1-224ENST00000483359 TMEM151BQ8IW70 566 aa16.89■□□□□ 0.29
CPNE1-224ENST00000483359 RGMAQ96B86 450 aa16.89■□□□□ 0.29
CPNE1-224ENST00000483359 TUBB1Q9H4B7 451 aa16.89■□□□□ 0.29
CPNE1-224ENST00000483359 BRF2Q9HAW0 419 aa16.89■□□□□ 0.29
CPNE1-224ENST00000483359 PNPOQ9NVS9 261 aa16.89■□□□□ 0.29
CPNE1-224ENST00000483359 GPN3Q9UHW5 284 aaPredicted RBP16.89■□□□□ 0.29
CPNE1-224ENST00000483359 MRPS18BQ9Y676 258 aaKnown RBP16.89■□□□□ 0.29
CPNE1-224ENST00000483359 JUNP05412 331 aaKnown RBP16.88■□□□□ 0.29
CPNE1-224ENST00000483359 FGF4P08620 206 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 NCF4Q15080 339 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 AP5B1Q2VPB7 878 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 UGT3A2Q3SY77 523 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 ENDOVQ8N8Q3 282 aaKnown RBP16.88■□□□□ 0.29
CPNE1-224ENST00000483359 SRFBP1Q8NEF9 429 aaKnown RBP16.88■□□□□ 0.29
CPNE1-224ENST00000483359 FAM76AQ8TAV0 307 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 PEX11GQ96HA9 241 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 GPN2Q9H9Y4 310 aaPredicted RBP16.88■□□□□ 0.29
CPNE1-224ENST00000483359 SLCO1B3Q9NPD5 702 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 PRDM7Q9NQW5 492 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 VPS29Q9UBQ0 182 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 A0A088AWK7 358 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 CNOT3O75175 753 aaKnown RBP16.88■□□□□ 0.29
CPNE1-224ENST00000483359 LIFP15018 202 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 ZNF10P21506 573 aaPredicted RBP16.88■□□□□ 0.29
CPNE1-224ENST00000483359 RPL14P50914 215 aaKnown RBP16.88■□□□□ 0.29
CPNE1-224ENST00000483359 MTTPP55157 894 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 SKP1P63208 163 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 OCRLQ01968 901 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 DNASE1L3Q13609 305 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 VWA2Q5GFL6 755 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 SPDYAQ5MJ70 313 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 OR4C11Q6IEV9 310 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 OR51Q1Q8NH59 317 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 CKAP2Q8WWK9 683 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 KIAA1143Q96AT1 154 aaPredicted RBP16.88■□□□□ 0.29
CPNE1-224ENST00000483359 ZNF717Q9BY31 904 aaPredicted RBP16.88■□□□□ 0.29
CPNE1-224ENST00000483359 SOX17Q9H6I2 414 aaPredicted RBP16.88■□□□□ 0.29
CPNE1-224ENST00000483359 IL17BQ9UHF5 180 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 PPT2Q9UMR5 302 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 MAP4K5Q9Y4K4 846 aa16.88■□□□□ 0.29
CPNE1-224ENST00000483359 KLF11O14901 512 aa16.87■□□□□ 0.29
CPNE1-224ENST00000483359 B3GALT2O43825 422 aa16.87■□□□□ 0.29
CPNE1-224ENST00000483359 EEDO75530 441 aaKnown RBP16.87■□□□□ 0.29
CPNE1-224ENST00000483359 JRKO75564 520 aa16.87■□□□□ 0.29
CPNE1-224ENST00000483359 CDC123O75794 336 aaPredicted RBP16.87■□□□□ 0.29
CPNE1-224ENST00000483359 HSD3B1P14060 373 aa16.87■□□□□ 0.29
CPNE1-224ENST00000483359 HIST1H1TP22492 207 aaPredicted RBP16.87■□□□□ 0.29
CPNE1-224ENST00000483359 ATP5A1P25705 553 aaKnown RBP16.87■□□□□ 0.29
CPNE1-224ENST00000483359 HSD3B2P26439 372 aa16.87■□□□□ 0.29
CPNE1-224ENST00000483359 XCR1P46094 333 aa16.87■□□□□ 0.29
CPNE1-224ENST00000483359 GUCY1A3Q02108 690 aa16.87■□□□□ 0.29
CPNE1-224ENST00000483359 FAM47EQ6ZV65 393 aa16.87■□□□□ 0.29
CPNE1-224ENST00000483359 PROSER1Q86XN7 944 aa16.87■□□□□ 0.29
CPNE1-224ENST00000483359 C1orf52Q8N6N3 182 aaKnown RBP16.87■□□□□ 0.29
CPNE1-224ENST00000483359 GBP7Q8N8V2 638 aaPredicted RBP16.87■□□□□ 0.29
CPNE1-224ENST00000483359 ACOT4Q8N9L9 421 aa16.87■□□□□ 0.29
CPNE1-224ENST00000483359 OR2T11Q8NH01 316 aa16.87■□□□□ 0.29
CPNE1-224ENST00000483359 APIPQ96GX9 242 aa16.87■□□□□ 0.29
CPNE1-224ENST00000483359 MAGEB18Q96M61 343 aa16.87■□□□□ 0.29
CPNE1-224ENST00000483359 QRFPRQ96P65 431 aa16.87■□□□□ 0.29
CPNE1-224ENST00000483359 TBCDQ9BTW9 1192 aa16.87■□□□□ 0.29
CPNE1-224ENST00000483359 ZNF282Q9UDV7 671 aaPredicted RBP16.87■□□□□ 0.29
CPNE1-224ENST00000483359 ACACAQ13085 2346 aa16.87■□□□□ 0.29
CPNE1-224ENST00000483359 ATP6AP2A0A1C7CYW4 349 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 CHST10O43529 356 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 ATP6AP2O75787 350 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 PIM1P11309 404 aaPredicted RBP16.86■□□□□ 0.29
CPNE1-224ENST00000483359 BSGP35613 385 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 EIF2S3P41091 472 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms