RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 SPASTQ9UBP0 616 aa17.35■□□□□ 0.37
SSR4-209ENST00000482902 B4GALT6Q9UBX8 382 aa17.35■□□□□ 0.37
SSR4-209ENST00000482902 KLK4Q9Y5K2 254 aa17.35■□□□□ 0.37
SSR4-209ENST00000482902 A0A075B6Q4 140 aa17.35■□□□□ 0.37
SSR4-209ENST00000482902 PQBP1O60828 265 aaKnown RBP17.35■□□□□ 0.37
SSR4-209ENST00000482902 NUDT6P53370 316 aa17.35■□□□□ 0.37
SSR4-209ENST00000482902 AP1S2P56377 157 aa17.35■□□□□ 0.37
SSR4-209ENST00000482902 DDX39BQ13838 428 aaKnown RBP17.35■□□□□ 0.37
SSR4-209ENST00000482902 SF1Q15637 639 aaKnown RBP17.35■□□□□ 0.37
SSR4-209ENST00000482902 CBLL1Q75N03 491 aa17.35■□□□□ 0.37
SSR4-209ENST00000482902 EIF3MQ7L2H7 374 aaKnown RBP17.35■□□□□ 0.37
SSR4-209ENST00000482902 COL21A1Q96P44 957 aa17.35■□□□□ 0.37
SSR4-209ENST00000482902 BRD9Q9H8M2 597 aa17.35■□□□□ 0.37
SSR4-209ENST00000482902 SMURF1Q9HCE7 757 aa17.35■□□□□ 0.37
SSR4-209ENST00000482902 V9GYH0 126 aa17.35■□□□□ 0.37
SSR4-209ENST00000482902 TFECO14948 347 aaPredicted RBP17.34■□□□□ 0.37
SSR4-209ENST00000482902 PRMT3O60678 531 aa17.34■□□□□ 0.37
SSR4-209ENST00000482902 CYP7B1O75881 506 aa17.34■□□□□ 0.37
SSR4-209ENST00000482902 CD22P20273 847 aa17.34■□□□□ 0.37
SSR4-209ENST00000482902 ZMAT1Q5H9K5 638 aa17.34■□□□□ 0.37
SSR4-209ENST00000482902 DPY19L3Q6ZPD9 716 aa17.34■□□□□ 0.37
SSR4-209ENST00000482902 CMTM8Q8IZV2 173 aa17.34■□□□□ 0.37
SSR4-209ENST00000482902 MTERF1Q99551 399 aaKnown RBP17.34■□□□□ 0.37
SSR4-209ENST00000482902 ROGDIQ9GZN7 287 aa17.34■□□□□ 0.37
SSR4-209ENST00000482902 ASAH2Q9NR71 780 aa17.34■□□□□ 0.37
SSR4-209ENST00000482902 VPS29Q9UBQ0 182 aa17.34■□□□□ 0.37
SSR4-209ENST00000482902 FAM8A1Q9UBU6 413 aa17.34■□□□□ 0.37
SSR4-209ENST00000482902 NUFIP1Q9UHK0 495 aaKnown RBP17.34■□□□□ 0.37
SSR4-209ENST00000482902 PRELID1Q9Y255 219 aa17.34■□□□□ 0.37
SSR4-209ENST00000482902 YY2O15391 372 aa17.33■□□□□ 0.37
SSR4-209ENST00000482902 AOC2O75106 756 aa17.33■□□□□ 0.37
SSR4-209ENST00000482902 GGT2P36268 569 aa17.33■□□□□ 0.37
SSR4-209ENST00000482902 ITGA1P56199 1179 aa17.33■□□□□ 0.37
SSR4-209ENST00000482902 CSTF3Q12996 717 aaKnown RBP17.33■□□□□ 0.37
SSR4-209ENST00000482902 TP53BP2Q13625 1128 aa17.33■□□□□ 0.37
SSR4-209ENST00000482902 BAK1Q16611 211 aa17.33■□□□□ 0.37
SSR4-209ENST00000482902 XKR6Q5GH73 641 aa17.33■□□□□ 0.37
SSR4-209ENST00000482902 ZDHHC20Q5W0Z9 365 aa17.33■□□□□ 0.37
SSR4-209ENST00000482902 PDE12Q6L8Q7 609 aaKnown RBP17.33■□□□□ 0.37
SSR4-209ENST00000482902 GAREM2Q75VX8 874 aa17.33■□□□□ 0.37
SSR4-209ENST00000482902 TP53I13Q8NBR0 393 aaPredicted RBP17.33■□□□□ 0.37
SSR4-209ENST00000482902 PXYLP1Q8TE99 480 aa17.33■□□□□ 0.37
SSR4-209ENST00000482902 MRPS31Q92665 395 aaKnown RBP17.33■□□□□ 0.37
SSR4-209ENST00000482902 MAGEB10Q96LZ2 347 aaPredicted RBP17.33■□□□□ 0.37
SSR4-209ENST00000482902 KCNC2Q96PR1 638 aa17.33■□□□□ 0.37
SSR4-209ENST00000482902 GON7Q9BXV9 100 aa17.33■□□□□ 0.37
SSR4-209ENST00000482902 MMP28Q9H239 520 aa17.33■□□□□ 0.37
SSR4-209ENST00000482902 REEP1Q9H902 201 aa17.33■□□□□ 0.37
SSR4-209ENST00000482902 FAM120CQ9NX05 1096 aaKnown RBP17.33■□□□□ 0.37
SSR4-209ENST00000482902 SATB2Q9UPW6 733 aa17.33■□□□□ 0.37
SSR4-209ENST00000482902 URODP06132 367 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 LAMP1P11279 417 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 UBL4AP11441 157 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 PKLRP30613 574 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 OR3A3P47888 321 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 ZNF79Q15937 498 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 FAM214AQ32MH5 1076 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 TOR1AIP1Q5JTV8 583 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 LIPJQ5W064 366 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 C19orf48Q6RUI8 117 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 GPR155Q7Z3F1 870 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 DEPDC4Q8N2C3 294 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 FAM109AQ8N4B1 249 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 OR8J2Q8NGG1 315 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 SH3KBP1Q96B97 665 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 TPD52L3Q96J77 140 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 CITED4Q96RK1 184 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 BEX2Q9BXY8 128 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 STMN3Q9NZ72 180 aa17.33■□□□□ 0.36
SSR4-209ENST00000482902 HSMCR30P0CW71 290 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 HLA-FP30511 346 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 CYP4F2P78329 520 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 OLR1P78380 273 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 C10orf62Q5T681 223 aaPredicted RBP17.32■□□□□ 0.36
SSR4-209ENST00000482902 ATCAYQ86WG3 371 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 CCDC28AQ8IWP9 274 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 OR5H6Q8NGV6 325 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 WDR20Q8TBZ3 569 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 ASB15Q8WXK1 588 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 MKRN2Q9H000 416 aaKnown RBP17.32■□□□□ 0.36
SSR4-209ENST00000482902 TPT1P8Q9HAU6 139 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 C3orf14Q9HBI5 128 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 DYRK4Q9NR20 520 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 RAD18Q9NS91 495 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 TAS2R16Q9NYV7 291 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 RUVBL1Q9Y265 456 aaKnown RBP17.32■□□□□ 0.36
SSR4-209ENST00000482902 HS3ST2Q9Y278 367 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 PCDHB11Q9Y5F2 797 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 PCM1Q15154 2024 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 SCN5AQ14524 2016 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 E7EQ34 232 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 C9P02748 559 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 NUDT7P0C024 238 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 PRIM2P49643 509 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 ACSM2AQ08AH3 577 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 HYAL2Q12891 473 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 ACSM2BQ68CK6 577 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 THOC6Q86W42 341 aaKnown RBP17.32■□□□□ 0.36
SSR4-209ENST00000482902 HS6ST3Q8IZP7 471 aa17.32■□□□□ 0.36
SSR4-209ENST00000482902 SLC39A11Q8N1S5 342 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms