RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 RBCK1Q9BYM8 510 aa17.34■□□□□ 0.37
SMIM4-204ENST00000482728 AICDAQ9GZX7 198 aa17.34■□□□□ 0.37
SMIM4-204ENST00000482728 COPS7BQ9H9Q2 264 aaPredicted RBP17.34■□□□□ 0.37
SMIM4-204ENST00000482728 ANAPC2Q9UJX6 822 aa17.34■□□□□ 0.37
SMIM4-204ENST00000482728 RNF11Q9Y3C5 154 aa17.34■□□□□ 0.37
SMIM4-204ENST00000482728 DOCK10Q96BY6 2186 aa17.33■□□□□ 0.37
SMIM4-204ENST00000482728 PCSK5Q92824 1860 aa17.33■□□□□ 0.37
SMIM4-204ENST00000482728 LOC102723996A0A087X1L8 192 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 OR2W5A6NFC9 320 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 SLC28A2O43868 658 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 PRMT3O60678 531 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 TGFB1P01137 390 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 PDGFAP04085 211 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 COX6A1P12074 109 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 ICAM2P13598 275 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 PIK3CBP42338 1070 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 CCT5P48643 541 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 ACTN3Q08043 901 aaPredicted RBP17.33■□□□□ 0.36
SMIM4-204ENST00000482728 ABRAXAS2Q15018 415 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 ABHD17CQ6PCB6 329 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 ATG14Q6ZNE5 492 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 CPEB2Q7Z5Q1 589 aaKnown RBP17.33■□□□□ 0.36
SMIM4-204ENST00000482728 HPS6Q86YV9 775 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 KBTBD2Q8IY47 623 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 PLPP5Q8NEB5 264 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 HUS1BQ8NHY5 278 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 MZB1Q8WU39 189 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 THOC3Q96J01 351 aaKnown RBP17.33■□□□□ 0.36
SMIM4-204ENST00000482728 KCNC2Q96PR1 638 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 SERINC2Q96SA4 455 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 SMAD5Q99717 465 aaKnown RBP17.33■□□□□ 0.36
SMIM4-204ENST00000482728 CENPKQ9BS16 269 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 MS4A8Q9BY19 250 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 ROGDIQ9GZN7 287 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 LHPPQ9H008 270 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 ZNF700Q9H0M5 742 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 LANCL2Q9NS86 450 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 RIC8BQ9NVN3 520 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 C5AR2Q9P296 337 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 PCTPQ9UKL6 214 aa17.33■□□□□ 0.36
SMIM4-204ENST00000482728 TNRC6AQ8NDV7 1962 aaKnown RBP17.33■□□□□ 0.36
SMIM4-204ENST00000482728 IGHV1-45A0A0A0MS14 117 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 A8MT66 165 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 MAGEB17A8MXT2 336 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 C4orf51C9J302 202 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 H0YIV9 168 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 DPM1O60762 260 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 SH3BGRLO75368 114 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 TBX6O95947 436 aaPredicted RBP17.32■□□□□ 0.36
SMIM4-204ENST00000482728 SBK3P0C264 359 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 MTTPP55157 894 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 RCN2Q14257 317 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 AP5B1Q2VPB7 878 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 AGAP7PQ5VUJ5 663 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 CYP4X1Q8N118 509 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 CA13Q8N1Q1 262 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 L3MBTL4Q8NA19 623 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 PTCHD1Q96NR3 888 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 AGAP4Q96P64 663 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 MTERF1Q99551 399 aaKnown RBP17.32■□□□□ 0.36
SMIM4-204ENST00000482728 TBCDQ9BTW9 1192 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 TUBB6Q9BUF5 446 aa17.32■□□□□ 0.36
SMIM4-204ENST00000482728 SEMA4BQ9NPR2 832 aaPredicted RBP17.32■□□□□ 0.36
SMIM4-204ENST00000482728 RP1L1Q8IWN7 2480 aaPredicted RBP17.32■□□□□ 0.36
SMIM4-204ENST00000482728 A0A1W2PQ72 361 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 FOXO6A8MYZ6 492 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 FAM227AF5H4B4 570 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 OR7A17O14581 309 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 SUV39H1O43463 412 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 GLRA3O75311 464 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 TUBBP07437 444 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 NUDT17P0C025 328 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 ATP5F1P24539 256 aaPredicted RBP17.31■□□□□ 0.36
SMIM4-204ENST00000482728 PTX3P26022 381 aaPredicted RBP17.31■□□□□ 0.36
SMIM4-204ENST00000482728 RAP1GDS1P52306 607 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 AP2B1P63010 937 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 HERVK_113P63132 956 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 RHAGQ02094 409 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 RUNX2Q13950 521 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 ZRSR2Q15696 482 aaKnown RBP17.31■□□□□ 0.36
SMIM4-204ENST00000482728 DEPDC1Q5TB30 811 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 KHDRBS2Q5VWX1 349 aaKnown RBP17.31■□□□□ 0.36
SMIM4-204ENST00000482728 TTC19Q6DKK2 380 aaPredicted RBP17.31■□□□□ 0.36
SMIM4-204ENST00000482728 LANCL3Q6ZV70 420 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 MILR1Q7Z6M3 343 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 ANKRD37Q7Z713 158 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 SLC22A9Q8IVM8 553 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 ARMC2Q8NEN0 867 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 OR52B6Q8NGF0 335 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 OR2W6PQ8NHA6 318 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 TM9SF4Q92544 642 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 CAVIN3Q969G5 261 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 RGMAQ96B86 450 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 NSUN5Q96P11 429 aaKnown RBP17.31■□□□□ 0.36
SMIM4-204ENST00000482728 QRFPRQ96P65 431 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 CDK15Q96Q40 435 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 NTMT1Q9BV86 223 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 ERVK-6Q9BXR3 956 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 OR51B5Q9H339 312 aa17.31■□□□□ 0.36
SMIM4-204ENST00000482728 ZNF552Q9H707 407 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms